RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NEK6Q9HC98 313 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 LIMD1Q9UGP4 676 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 ILVBLA1L0T0 632 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 AGRPO00253 132 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 TNPO2O14787 897 aaKnown RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 SCAMP3O14828 347 aaKnown RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 CST1P01037 141 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 HNRNPFP52597 415 aaKnown RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 FAM110CQ1W6H9 321 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 COLEC12Q5KU26 742 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 RAP1GAP2Q684P5 730 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 GATAD2AQ86YP4 633 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 MMAAQ8IVH4 418 aaKnown RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 CFAP52Q8N1V2 620 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 CNIH3Q8TBE1 160 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 NUDT8Q8WV74 236 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 ZNF486Q96H40 463 aaPredicted RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 HBEGFQ99075 208 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 PARK7Q99497 189 aaKnown RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 RGS18Q9NS28 235 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 ABCD2Q9UBJ2 740 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 PADI3Q9ULW8 664 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 ORC6Q9Y5N6 252 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 ZSWIM8A7E2V4 1837 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 DYTNA2CJ06 578 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 HAS3O00219 553 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 CYP4B1P13584 511 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 IMPDH1P20839 514 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 MZF1P28698 734 aaPredicted RBP19.4■□□□□ 0.7
TRIM58-201ENST00000366481 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 SLC16A12Q6ZSM3 486 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 MCOLN3Q8TDD5 553 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 ADAM2Q99965 735 aa19.4■□□□□ 0.7
TRIM58-201ENST00000366481 PLXNB2O15031 1838 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 KCNAB2Q13303 367 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 ADPRMQ3LIE5 342 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 GALNT5Q7Z7M9 940 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 P2RY8Q86VZ1 359 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 CNTN4Q8IWV2 1026 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 NCLNQ969V3 563 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 MYEOVQ96EZ4 313 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 FAM118AQ9NWS6 357 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 TBC1D14Q9P2M4 693 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 FTH1P02794 183 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 UMPSP11172 480 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 CDH1P12830 882 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 FMO3P31513 532 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 ACVRL1P37023 503 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRIM58-201ENST00000366481 MARC1Q5VT66 337 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 CHDHQ8NE62 594 aaPredicted RBP19.39■□□□□ 0.69
TRIM58-201ENST00000366481 HDAC2Q92769 488 aaKnown RBP19.39■□□□□ 0.69
TRIM58-201ENST00000366481 REXO4Q9GZR2 422 aaKnown RBP19.39■□□□□ 0.69
TRIM58-201ENST00000366481 CSNK1G1Q9HCP0 422 aa19.39■□□□□ 0.69
TRIM58-201ENST00000366481 FADS2O95864 444 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 PIGAP37287 484 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 UFM1P61960 85 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 PHC1P78364 1004 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 KIAA0930Q6ICG6 404 aaPredicted RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 C8orf82Q6P1X6 216 aaPredicted RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 RTL3Q8N8U3 475 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TSPAN17Q96FV3 270 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TSGA13Q96PP4 275 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TRIM54Q9BYV2 358 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TRIT1Q9H3H1 467 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 PRRC2BQ5JSZ5 2229 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TRIM64BA6NI03 449 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 AXIN1O15169 862 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 GTF2E2P29084 291 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TGFBR1P36897 503 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 CTF1Q16619 201 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 ZNF678Q5SXM1 525 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 ISCA2Q86U28 154 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 CILP2Q8IUL8 1156 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 KLHDC9Q8NEP7 349 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 IGSF8Q969P0 613 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 ZHX1-C8orf76Q96EF9 292 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 C17orf80Q9BSJ5 609 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TBCDQ9BTW9 1192 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 RFPL2O75678 378 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 GP2P55259 537 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 SEMA3AQ14563 771 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TRIP4Q15650 581 aaPredicted RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 SIRPB2Q5JXA9 342 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 CATSPEREQ5SY80 951 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 PTCD2Q8WV60 388 aaKnown RBP19.38■□□□□ 0.69
TRIM58-201ENST00000366481 FKBP10Q96AY3 582 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 TEX37Q96LM6 180 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 ABCC13Q9NSE7 274 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 PCDH10Q9P2E7 1040 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 PCDHA9Q9Y5H5 950 aa19.38■□□□□ 0.69
TRIM58-201ENST00000366481 CDK14O94921 469 aa19.37■□□□□ 0.69
TRIM58-201ENST00000366481 ALPLP05186 524 aa19.37■□□□□ 0.69
TRIM58-201ENST00000366481 SIM2Q14190 667 aaPredicted RBP19.37■□□□□ 0.69
TRIM58-201ENST00000366481 PCBP1Q15365 356 aaKnown RBP eCLIP19.37■□□□□ 0.69
TRIM58-201ENST00000366481 CTU2Q2VPK5 515 aaKnown RBP19.37■□□□□ 0.69
TRIM58-201ENST00000366481 UNC50Q53HI1 259 aa19.37■□□□□ 0.69
TRIM58-201ENST00000366481 KDELC1Q6UW63 502 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms