RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 HSD11B2P80365 405 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 ADORA2A-AS1P86434 159 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 DPYSQ14117 519 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZFYVE27Q5T4F4 411 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 KLHDC7AQ5VTJ3 777 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 IGFL2Q6UWQ7 119 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 AVL9Q8NBF6 648 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 MSANTD4Q8NCY6 345 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 CATSPER1Q8NEC5 780 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF599Q96NL3 588 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 TAAR6Q96RI8 345 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 TLR10Q9BXR5 811 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 VPS16Q9H269 839 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 DHX35Q9H5Z1 703 aaKnown RBP8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 POT1Q9NUX5 634 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 P4HTMQ9NXG6 502 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 AP4E1Q9UPM8 1137 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 MYO7BQ6PIF6 2116 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 NSD1Q96L73 2696 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 SPTBP11277 2137 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 A0A1W2PQ67 120 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 TLCD2A6NGC4 264 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 SIGLEC16A6NMB1 481 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 KCNN4O15554 427 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 LDB2O43679 373 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 ALPPP05187 535 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 PYGLP06737 847 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 KLK3P07288 261 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 UMODP07911 640 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 UNGP13051 313 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 SSTR2P30874 369 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 KPNA2P52292 529 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 GSCP56915 257 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 OTUD4Q01804 1114 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CDR2Q01850 454 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 Q0VFX4 171 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CDC16Q13042 620 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CAMK4Q16566 473 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 DNTTIP2Q5QJE6 756 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 FAM182AQ5T1J6 154 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 AGAP9Q5VTM2 703 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 TRIM72Q6ZMU5 477 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 FAM83HQ6ZRV2 1179 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 MON1BQ7L1V2 547 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF808Q8N4W9 903 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 GPR26Q8NDV2 337 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 DNAJB14Q8TBM8 379 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 PPP4R1Q8TF05 950 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CLIP3Q96DZ5 547 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 MCEEQ96PE7 176 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 MESP1Q9BRJ9 268 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 TMEM121Q9BTD3 319 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 SNRNP25Q9BV90 132 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 FAM83DQ9H4H8 585 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CHST11Q9NPF2 352 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CWC15Q9P013 229 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 CHKBQ9Y259 395 aa8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
HMGB1P39-201ENST00000366304 NBEAL1Q6ZS30 2694 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 OR5K3A6NET4 321 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 SLC9B1P1A6NJY1 282 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 HCRTR1O43613 425 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 GFPT2O94808 682 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CTSBP07858 339 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CBSLP0DN79 551 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 UCHL3P15374 230 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF30P17039 623 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 MST1P26927 711 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 HTR7P34969 479 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CBSP35520 551 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 DSC2Q02487 901 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF169Q14929 603 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 RPE65Q16518 533 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 INSCQ1MX18 579 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 SMTNL2Q2TAL5 461 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 VWA2Q5GFL6 755 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ALS2CLQ60I27 953 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CYB5D1Q6P9G0 228 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 WASH2PQ6VEQ5 465 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 NCCRP1Q6ZVX7 275 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 KMT5CQ86Y97 462 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 RAB43Q86YS6 212 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CLEC1AQ8NC01 280 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ACBD4Q8NC06 268 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 C3orf20Q8ND61 904 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 OR8K5Q8NH50 307 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CPT1BQ92523 772 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 NRGNQ92686 78 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CXorf40BQ96DE9 158 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 C14orf79Q96F83 325 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 MDFIQ99750 246 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CNPY3Q9BT09 278 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms