RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 GTF2H2CQ6P1K8 395 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 C14orf80Q86SX3 495 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 CLIP4Q8N3C7 705 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 CLDN19Q8N6F1 224 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 PACRGLQ8N7B6 248 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 TMEM159Q96B96 161 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-201ENST00000361866 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 DNAJB9Q9UBS3 223 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 TESMINQ9Y4I5 508 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 DNAJC15Q9Y5T4 150 aa13.73□□□□□ -0.21
COL6A1-201ENST00000361866 FAM220BPB1ANY3 271 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 FBP2O00757 339 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 CD36P16671 472 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SCNN1AP37088 669 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 NUDT6P53370 316 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 MXD1Q05195 221 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 TUSC3Q13454 348 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 C2CD4AQ8NCU7 369 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 PHF10Q8WUB8 498 aaKnown RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 ITCHQ96J02 903 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 C8orf4Q9NR00 106 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 MYL12BO14950 172 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SUV39H1O43463 412 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 CYP2A7P20853 494 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 PBX3P40426 434 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SLC26A3P40879 764 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 IL12RB1P42701 662 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 RPS24P62847 133 aaKnown RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 PFKPQ01813 784 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 ABRQ12979 859 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 KCNAB2Q13303 367 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 CEP78Q5JTW2 689 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 KLHL17Q6TDP4 642 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 KBTBD8Q8NFY9 601 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 HDHD2Q9H0R4 259 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 RAB23Q9ULC3 237 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 VPS4AQ9UN37 437 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 FAM234BA2RU67 622 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SLC28A1O00337 649 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 IMPDH2P12268 514 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SH3BP2P78314 561 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 RFTN1Q14699 578 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 RPF2Q9H7B2 306 aaKnown RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 PTBP2Q9UKA9 531 aaKnown RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 VILLO15195 856 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 STK16O75716 305 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 OR56A5P0C7T3 313 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 CAPN3P20807 821 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 BCAP31P51572 246 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 FCGRTP55899 365 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-201ENST00000361866 PTGR1Q14914 329 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 CYP2A13Q16696 494 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 XKR6Q5GH73 641 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 SLC22A16Q86VW1 577 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 EEF1AKMT1Q8WVE0 214 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 MYDGFQ969H8 173 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 FEM1CQ96JP0 617 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 CITED4Q96RK1 184 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 NMUR1Q9HB89 426 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 MAGEE1Q9HCI5 957 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
COL6A1-201ENST00000361866 C1RP00736 705 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 HNF4AP41235 474 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 EEFSECP57772 596 aaKnown RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 OR4D2P58180 307 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 SLC34A3Q8N130 599 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 HAPLN3Q96S86 360 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 HERC2P3Q9BVR0 1158 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 MUC13Q9H3R2 512 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 GNPTGQ9UJJ9 305 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 HS3ST4Q9Y661 456 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 SMCHD1A6NHR9 2005 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 MEIS3P2A8K0S8 358 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 EFCAB9A8MZ26 197 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 CDH1P12830 882 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 OXTRP30559 389 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 PRKAG1P54619 331 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 CNTN1Q12860 1018 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 UNC50Q53HI1 259 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 TRMT11Q7Z4G4 463 aaKnown RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 METTL25Q8N6Q8 603 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 FAM124BQ9H5Z6 455 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 KAT8Q9H7Z6 458 aaKnown RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 CCNB1IP1Q9NPC3 277 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 RAPGEFL1Q9UHV5 662 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-201ENST00000361866 CEPT1Q9Y6K0 416 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms