RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 EFCAB10A6NFE3 127 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 TGDSO95455 350 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF8P17098 575 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 CTSOP43234 321 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 MLLT6P55198 1093 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 NR1D2Q14995 579 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 DRICH1Q6PGQ1 229 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 OLFML1Q6UWY5 402 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 FAM98AQ8NCA5 519 aaKnown RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 UGT2B17O75795 530 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 CADM2Q8N3J6 435 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF540Q8NDQ6 660 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF599Q96NL3 588 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 SPRTNQ9H040 489 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 INTS10Q9NVR2 710 aaKnown RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 PLIN3O60664 434 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 NIPSNAP2O75323 286 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 RYKP34925 604 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 ZMIZ2Q8NF64 920 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF354BQ96LW1 612 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 RAD9AQ99638 391 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 SH3GLB1Q9Y371 365 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 BBIP1A8MTZ0 92 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 PSMD7P51665 324 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 RINLQ6ZS11 566 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 SERINC5Q86VE9 423 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 GABRDO14764 452 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 STX11O75558 287 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 FAM163BP0C2L3 166 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 GNAZP19086 355 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 SCNN1AP37088 669 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 MAPK11Q15759 364 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 SIRPB2Q5JXA9 342 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 LY6G5CQ5SRR4 150 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 PROSER1Q86XN7 944 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 LIX1Q8N485 282 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 GSTCDQ8NEC7 633 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 BADQ92934 168 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 PYCR2Q96C36 320 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 MTERF1Q99551 399 aaKnown RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 GATA5Q9BWX5 397 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 ELL3Q9HB65 397 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 MRPS30Q9NP92 439 aaKnown RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 A0A0G2JN53 185 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 HLA-EP13747 358 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 TRAF3Q13114 568 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 FBXO15Q8NCQ5 510 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 CMASQ8NFW8 434 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 Q96MT0 163 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 HOPXQ9BPY8 73 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 MAGEL2Q9UJ55 1249 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 LEFTY2O00292 366 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 HOXB2P14652 356 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 SLC13A2Q13183 592 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 TRIM25Q14258 630 aaKnown RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 DDI2Q5TDH0 399 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 ZCCHC7Q8N3Z6 543 aaKnown RBP18.34■□□□□ 0.53
CLIP2-202ENST00000361545 DEFB119Q8N690 84 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF781Q8N8C0 355 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 RTKNQ9BST9 563 aa18.34■□□□□ 0.53
CLIP2-202ENST00000361545 RAPSNQ13702 412 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 QPCTQ16769 361 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 RFTN2Q52LD8 501 aaPredicted RBP18.33■□□□□ 0.53
CLIP2-202ENST00000361545 TMEM209Q96SK2 561 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 GTPBP2Q9BX10 602 aaKnown RBP18.33■□□□□ 0.53
CLIP2-202ENST00000361545 CFAP20Q9Y6A4 193 aaKnown RBP18.33■□□□□ 0.53
CLIP2-202ENST00000361545 MYADML2A6NDP7 307 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 CENPXA8MT69 81 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 SAP18O00422 153 aaKnown RBP18.33■□□□□ 0.53
CLIP2-202ENST00000361545 MED26O95402 600 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 LAMP2P13473 410 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 VEGFBP49765 207 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 CCNHP51946 323 aaPredicted RBP18.33■□□□□ 0.53
CLIP2-202ENST00000361545 C1QTNF8P60827 252 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 MYBPC1Q00872 1141 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 ZBTB6Q15916 424 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 JSRP1Q96MG2 331 aaPredicted RBP18.33■□□□□ 0.53
CLIP2-202ENST00000361545 GSTK1Q9Y2Q3 226 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 C15orf41Q9Y2V0 281 aa18.33■□□□□ 0.53
CLIP2-202ENST00000361545 PIP5K1BO14986 540 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 MMP20O60882 483 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 ITGA1P56199 1179 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 CHRNA6Q15825 494 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 XKR4Q5GH76 650 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 MS4A13Q5J8X5 152 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 IPCEF1Q8WWN9 437 aaPredicted RBP18.33■□□□□ 0.52
CLIP2-202ENST00000361545 HEBP2Q9Y5Z4 205 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 TP73O15350 636 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 CLDN7O95471 211 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 ANPEPP15144 967 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 KRR1Q13601 381 aaKnown RBP18.33■□□□□ 0.52
CLIP2-202ENST00000361545 GLYATQ6IB77 296 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 KRT77Q7Z794 578 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 PACS2Q86VP3 889 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 SPPL2CQ8IUH8 684 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 DEPDC4Q8N2C3 294 aa18.33■□□□□ 0.52
CLIP2-202ENST00000361545 AGAP11Q8TF27 550 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms