RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 KLHL31Q9H511 634 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SLCO1B3Q9NPD5 702 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SLC17A6Q9P2U8 582 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 RGSL1A5PLK6 1076 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SHOX2O60902 331 aaPredicted RBP20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 IFNGP01579 166 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CASRP41180 1078 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 PCDHGA12O60330 932 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CSTF2P33240 577 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 PDX1P52945 283 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 BTN3A2P78410 334 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 BBS12Q6ZW61 710 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SH3RF1Q7Z6J0 888 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 COX18Q8N8Q8 333 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 RP9Q8TA86 221 aaKnown RBP20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 PLEKHA1Q9HB21 404 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 BRD7Q9NPI1 651 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 B4GALT2O60909 372 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CHRNA1P02708 482 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 C4BPBP20851 252 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 HKDC1Q2TB90 917 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SPANXN2Q5MJ10 180 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 FBXW11Q9UKB1 542 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 KCNK6Q9Y257 313 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 C9J4A7 227 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SSNA1O43805 119 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CSF2RAP15509 400 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CORO7P57737 925 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 RGS8P57771 180 aaPredicted RBP20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 MEA1Q16626 185 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 UBE2J2Q8N2K1 259 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 PLD5Q8N7P1 536 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 OR13C4Q8NGS5 318 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 SGIP1Q9BQI5 828 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CLEC4MQ9H2X3 399 aaPredicted RBP20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 STX11O75558 287 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 CLCN7P51798 805 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 CREB5Q02930 508 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 CBFBQ13951 182 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 VPS26BQ4G0F5 336 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 MZT2AQ6P582 158 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 CAMK1DQ8IU85 385 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 GTPBP3Q969Y2 492 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 BTBD1Q9H0C5 482 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 ERGIC3Q9Y282 383 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 OR4F21O95013 312 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 MTHFRP42898 656 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 POLR2JP52435 117 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 UBAP2Q5T6F2 1119 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 ATXN2LQ8WWM7 1075 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 STK16O75716 305 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 BDKRB1P46663 353 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 CLCNKAP51800 687 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 NCBP2P52298 156 aaKnown RBP eCLIP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 RIN1Q13671 783 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 DNASE1L1P49184 302 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 TAS2R50P59544 299 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 EOGTQ5NDL2 527 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 GCNT6Q5T4J0 391 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 IL23RQ5VWK5 629 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 SYPL2Q5VXT5 272 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 PLOD3O60568 738 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 FADS2O95864 444 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 TYRP14679 529 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 IDO1P14902 403 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 KRR1Q13601 381 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 DGUOKQ16854 277 aa20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 DHX33Q9H6R0 707 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-201ENST00000361246 S100GP29377 79 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 EIF1AXP47813 144 aaKnown RBP20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 DAOAP59103 153 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 ARHGAP1Q07960 439 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 CA9Q16790 459 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 NAT14Q8WUY8 206 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 TBX5Q99593 518 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 FUCA2Q9BTY2 467 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 MIOSQ9NXC5 875 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 PHF11Q9UIL8 331 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 KLF8O95600 359 aaPredicted RBP20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 SNAPC1Q16533 368 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 ARHGAP40Q5TG30 622 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 IQCHQ86VS3 1027 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 RTL3Q8N8U3 475 aaKnown RBP20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 OR5T3Q8NGG3 340 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 ART4Q93070 314 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 TSPAN18Q96SJ8 248 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 GORASP1Q9BQQ3 440 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 APOBEC3GQ9HC16 384 aaKnown RBP20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 TMEM51Q9NW97 253 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 PCYOX1Q9UHG3 505 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 PCDHGB3Q9Y5G1 929 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 PRMT2P55345 433 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 DGAT2Q96PD7 388 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 ATRNL1Q5VV63 1379 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 STX16-NPEPL1H3BU86 382 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 STX16O14662 325 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 MATN3O15232 486 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 CBLP22681 906 aa20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 CDKN1CP49918 316 aaPredicted RBP20.03■□□□□ 0.8
CDC42BPB-201ENST00000361246 ZNF542PQ5EBM4 170 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms