RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 PIWIL3Q7Z3Z3 882 aaKnown RBP20.48■□□□□ 0.87
TRIM3-202ENST00000359518 ZDHHC13Q8IUH4 622 aa20.48■□□□□ 0.87
TRIM3-202ENST00000359518 FBXO44Q9H4M3 255 aa20.48■□□□□ 0.87
TRIM3-202ENST00000359518 TMEM165Q9HC07 324 aa20.48■□□□□ 0.87
TRIM3-202ENST00000359518 NLRC5Q86WI3 1866 aa20.48■□□□□ 0.87
TRIM3-202ENST00000359518 HTTP42858 3142 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 TDRD15B5MCY1 1934 aaKnown RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 SCAMP3O14828 347 aaKnown RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 ANXA6P08133 673 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 INHBBP09529 407 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 CBX3Q13185 183 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 SPESP1Q6UW49 350 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 RBM12BQ8IXT5 1001 aaKnown RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 TSPEARQ8WU66 669 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 MUC13Q9H3R2 512 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 IKZF5Q9H5V7 419 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 ZFP14Q9HCL3 533 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 ZNF639Q9UID6 485 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 TYW5A2RUC4 315 aaKnown RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 G3V2T6 193 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 GMNNO75496 209 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 SLC2A4P14672 509 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 PHEXP78562 749 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 ABRAXAS2Q15018 415 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 CTSL3PQ5NE16 218 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 AFTPHQ6ULP2 937 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 THAP5Q7Z6K1 395 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 NKAPQ8N5F7 415 aaKnown RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 CCDC138Q96M89 665 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 TRIB3Q96RU7 358 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 BEGAINQ9BUH8 593 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 CINPQ9BW66 212 aaPredicted RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 NUSAP1Q9BXS6 441 aaKnown RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 ZIM2Q9NZV7 527 aa20.47■□□□□ 0.87
TRIM3-202ENST00000359518 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.47■□□□□ 0.87
TRIM3-202ENST00000359518 ZNF623O75123 536 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 PLA2G16P53816 162 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 TRIP4Q15650 581 aaPredicted RBP20.46■□□□□ 0.87
TRIM3-202ENST00000359518 SERINC5Q86VE9 423 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 CLHC1Q8NHS4 586 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 CD200R1Q8TD46 325 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 GIPC2Q8TF65 315 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 ISG20Q96AZ6 181 aaKnown RBP20.46■□□□□ 0.87
TRIM3-202ENST00000359518 AASSQ9UDR5 926 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 MAGEL2Q9UJ55 1249 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 PCDHB3Q9Y5E6 796 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 C2orf81A6NN90 581 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 TOR1BO14657 336 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 CST1P01037 141 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 RAP2AP10114 183 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 TACR2P21452 398 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 GDF5P43026 501 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 RPL38P63173 70 aaKnown RBP20.46■□□□□ 0.87
TRIM3-202ENST00000359518 SULT1C3Q6IMI6 304 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 BTLAQ7Z6A9 289 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 C8orf59Q8N0T1 100 aaPredicted RBP20.46■□□□□ 0.87
TRIM3-202ENST00000359518 PDPRQ8NCN5 879 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 OR4F6Q8NGB9 312 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 ZNF583Q96ND8 569 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 PDE4DIPQ5VU43 2346 aa20.46■□□□□ 0.87
TRIM3-202ENST00000359518 LAMA2P24043 3122 aaKnown RBP20.46■□□□□ 0.87
TRIM3-202ENST00000359518 STX16O14662 325 aa20.45■□□□□ 0.87
TRIM3-202ENST00000359518 CRHBPP24387 322 aa20.45■□□□□ 0.87
TRIM3-202ENST00000359518 FRA10AC1Q70Z53 315 aa20.45■□□□□ 0.87
TRIM3-202ENST00000359518 COLGALT2Q8IYK4 626 aa20.45■□□□□ 0.87
TRIM3-202ENST00000359518 PHACTR4Q8IZ21 702 aa20.45■□□□□ 0.87
TRIM3-202ENST00000359518 ADGRE2Q9UHX3 823 aa20.45■□□□□ 0.87
TRIM3-202ENST00000359518 H0YAE9 185 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 CBX4O00257 560 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 EPOP01588 193 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 HOXD9P28356 352 aaPredicted RBP20.45■□□□□ 0.86
TRIM3-202ENST00000359518 HMGCS1Q01581 520 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 MOGQ16653 247 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 GTDC1Q4AE62 458 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 LINGO4Q6UY18 593 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 SNX29P2Q8IUI4 249 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 TRPV1Q8NER1 839 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 OR2T12Q8NG77 320 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 SDCCAG3Q96C92 435 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 AMBRA1Q9C0C7 1298 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 PFDN4Q9NQP4 134 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 TBCCD1Q9NVR7 557 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 PCDHB8Q9UN66 801 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 CPNE6O95741 557 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 PRLP01236 227 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 TYMPP19971 482 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 SLC6A4P31645 630 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 CTU2Q2VPK5 515 aaKnown RBP20.45■□□□□ 0.86
TRIM3-202ENST00000359518 RBM23Q86U06 439 aaKnown RBP20.45■□□□□ 0.86
TRIM3-202ENST00000359518 SPARTQ8N0X7 666 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 FRS2Q8WU20 508 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 NCLNQ969V3 563 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 CRISPLD1Q9H336 500 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 C8orf4Q9NR00 106 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 FARSBQ9NSD9 589 aaKnown RBP20.45■□□□□ 0.86
TRIM3-202ENST00000359518 COMMD8Q9NX08 183 aa20.45■□□□□ 0.86
TRIM3-202ENST00000359518 FUOMA2VDF0 154 aa20.44■□□□□ 0.86
TRIM3-202ENST00000359518 DRGXA6NNA5 263 aa20.44■□□□□ 0.86
TRIM3-202ENST00000359518 AXIN1O15169 862 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms