RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 KIRREL3Q8IZU9 778 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 STK40Q8N2I9 435 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 RAB3IL1Q8TBN0 382 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 BPIFB1Q8TDL5 484 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 OSCP1Q8WVF1 389 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 FGF14Q92915 247 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SMARCD2Q92925 531 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 FOXJ1Q92949 421 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ITPKCQ96DU7 683 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CHFRQ96EP1 664 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CDK15Q96Q40 435 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 HBEGFQ99075 208 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TBC1D10AQ9BXI6 508 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PCDH12Q9NPG4 1184 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SEMA4BQ9NPR2 832 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TCF7L2Q9NQB0 619 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 HPS4Q9NQG7 708 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SAR1AQ9NR31 198 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CACNA2D2Q9NY47 1150 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 NDUFA13Q9P0J0 144 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TBC1D14Q9P2M4 693 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 BAIAP2L1Q9UHR4 511 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TRMT6Q9UJA5 497 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TMPRSS11EQ9UL52 423 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 RNF112Q9ULX5 631 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 APOBEC2Q9Y235 224 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CAPN14A8MX76 684 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 B2RBV5 119 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 INPP4BO15327 924 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SOCS5O75159 536 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SLC25A14O95258 325 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 FGF19O95750 216 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 IL1BP01584 269 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 APOA4P06727 396 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PORP16435 677 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 EEF1DP29692 281 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ARL1P40616 181 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CLCN7P51798 805 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PRKAA2P54646 552 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SEC13P55735 322 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SH3BP2P78314 561 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SLC25A3Q00325 362 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 B4GALNT1Q00973 533 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 RAD51Q06609 339 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 KCNC3Q14003 757 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SPCS2Q15005 226 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SLC14A2Q15849 920 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TCHHL1Q5QJ38 904 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SEL1L3Q68CR1 1132 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 EPGNQ6UW88 154 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PARM1Q6UWI2 310 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 VITQ6UXI7 678 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 USP45Q70EL2 814 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CUZD1Q86UP6 607 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 AHI1Q8N157 1196 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PCDH20Q8N6Y1 951 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 KDM1BQ8NB78 822 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CFAP61Q8NHU2 1237 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ZNF398Q8TD17 642 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SKA2Q8WVK7 121 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SCRN2Q96FV2 425 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 NSL1Q96IY1 281 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 FAM161BQ96MY7 647 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ATOH8Q96SQ7 321 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 HEPHQ9BQS7 1158 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CCDC106Q9BWC9 280 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SPATA16Q9BXB7 569 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CADM1Q9BY67 442 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CLPBQ9H078 707 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 P2RY12Q9H244 342 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 GSTO2Q9H4Y5 243 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SFXN1Q9H9B4 322 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ARHGEF3Q9NR81 526 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TXLNGQ9NUQ3 528 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 INTS10Q9NVR2 710 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ELOVL2Q9NXB9 296 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 MSRAQ9UJ68 235 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ADAMTS6Q9UKP5 1117 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PLA2G4CQ9UP65 541 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 BTRCQ9Y297 605 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 RAP2CQ9Y3L5 183 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TIMM22Q9Y584 194 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 NUP210Q8TEM1 1887 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-202ENST00000359366 TRPM6Q9BX84 2022 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 TBC1D3BA6NDS4 549 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 TMEM202A6NGA9 273 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 OR2AG2A6NM03 316 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 TMEM114B3SHH9 223 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 SPECC1L-ADORA2AF8WAN1 911 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 H0YC42 278 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 K7ESM1 405 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 MATN2O00339 956 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 PRMT5O14744 637 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-202ENST00000359366 NDUFB5O43674 189 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 VPS26AO75436 327 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 ADH1CP00326 375 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 RBP1P09455 135 aa5.01□□□□□ -1.61
ATXN3-202ENST00000359366 TIMP2P16035 220 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms