RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 SCHIP1Q9P0W5 487 aaPredicted RBP18.38■□□□□ 0.53
SNX11-201ENST00000359238 CNOT6Q9ULM6 557 aaKnown RBP18.38■□□□□ 0.53
SNX11-201ENST00000359238 SLCO1B7G3V0H7 640 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 SOCS2O14508 198 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 OXSR1O95747 527 aaPredicted RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 FGF19O95750 216 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 EPOP01588 193 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 CHRNGP07510 517 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 ALPIP09923 528 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 RHOAP61586 193 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 TIAL1Q01085 375 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX11-201ENST00000359238 SEMG2Q02383 582 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 ACVR1Q04771 509 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 NSUN2Q08J23 767 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX11-201ENST00000359238 TMEM198Q66K66 360 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 TMEM26Q6ZUK4 368 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 EFHBQ8N7U6 833 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 OR4K2Q8NGD2 314 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 LPGAT1Q92604 370 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 PBXIP1Q96AQ6 731 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 PPP1R36Q96LQ0 422 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 LRRC3BQ96PB8 259 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 APOL5Q9BWW9 433 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 DRC3Q9H069 523 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 NMRAL1Q9HBL8 299 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 HACD3Q9P035 362 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 RUVBL2Q9Y230 463 aaKnown RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 MRPS23Q9Y3D9 190 aaKnown RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 J3QRK9 145 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 PAPSS2O95340 614 aaPredicted RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 CTPS1P17812 591 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 LEPRP48357 1165 aaKnown RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 ZNF140P52738 457 aaPredicted RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 RAB10P61026 200 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 GRSF1Q12849 480 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX11-201ENST00000359238 CROCCQ5TZA2 2017 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 CPXM2Q8N436 756 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 FSTL5Q8N475 847 aaPredicted RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 SLC15A4Q8N697 577 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 STARD8Q92502 1023 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 SMG7Q92540 1137 aaKnown RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 FBXL8Q96CD0 374 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 CGREF1Q99674 301 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 MFSD1Q9H3U5 465 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 OXSMQ9NWU1 459 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 EVLQ9UI08 416 aaPredicted RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 PCDHB9Q9Y5E1 797 aa18.37■□□□□ 0.53
SNX11-201ENST00000359238 COPG1Q9Y678 874 aaKnown RBP18.37■□□□□ 0.53
SNX11-201ENST00000359238 C2orf16Q68DN1 1984 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 MPOP05164 745 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 CKMT2P17540 419 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 PFKLP17858 780 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 TFEBP19484 476 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 S100A1P23297 94 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 DDX6P26196 483 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNX11-201ENST00000359238 CA5AP35218 305 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 PRKAA1Q13131 559 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 CYP2A13Q16696 494 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 MPPE1Q53F39 396 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 DGKKQ5KSL6 1271 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 ACDQ96AP0 544 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 CDKN2AIPNLQ96HQ2 116 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 LMLNQ96KR4 655 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 TCF12Q99081 682 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 C1orf50Q9BV19 199 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 IGFLR1Q9H665 355 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 ABCB8Q9NUT2 735 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 RIC8BQ9NVN3 520 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 SMOXQ9NWM0 555 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 MID2Q9UJV3 735 aa18.36■□□□□ 0.53
SNX11-201ENST00000359238 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.35■□□□□ 0.53
SNX11-201ENST00000359238 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.35■□□□□ 0.53
SNX11-201ENST00000359238 NEMP2A6NFY4 417 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 ANKRD66B4E2M5 251 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 E7ENX8 843 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 KPNA4O00629 521 aaPredicted RBP18.35■□□□□ 0.53
SNX11-201ENST00000359238 SLC7A4O43246 635 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 NXNQ6DKJ4 435 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 ZSWIM9Q86XI8 627 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 DCAF4L2Q8NA75 395 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 PCYOX1LQ8NBM8 494 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 SLC28A3Q9HAS3 691 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 SARDHQ9UL12 918 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 CORINQ9Y5Q5 1042 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 TARM1B6A8C7 271 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 DLGAP1O14490 977 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 AQP9O43315 295 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 NOL3O60936 208 aaKnown RBP18.35■□□□□ 0.53
SNX11-201ENST00000359238 GNAO1P09471 354 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 STMN1P16949 149 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 NFATC3Q12968 1075 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 DUSP6Q16828 381 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 PLEKHG6Q3KR16 790 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 THOC7Q6I9Y2 204 aaKnown RBP18.35■□□□□ 0.53
SNX11-201ENST00000359238 GLT6D1Q7Z4J2 308 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 HEXDCQ8WVB3 486 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 PPWD1Q96BP3 646 aaKnown RBP18.35■□□□□ 0.53
SNX11-201ENST00000359238 TUBA1CQ9BQE3 449 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 POLR1BQ9H9Y6 1135 aa18.35■□□□□ 0.53
SNX11-201ENST00000359238 NSMCE4AQ9NXX6 385 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms