RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ESR1P03372 595 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 GDF5P43026 501 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 CACNG1Q06432 222 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 ABRQ12979 859 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 UNC50Q53HI1 259 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 ZCCHC8Q6NZY4 707 aaKnown RBP12.11□□□□□ -0.47
COL20A1-201ENST00000358894 XKR5Q6UX68 686 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 SH2D5Q6ZV89 423 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
COL20A1-201ENST00000358894 RORBQ92753 470 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 ZNF558Q96NG5 402 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 PANX1Q96RD7 426 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 LRTM1Q9HBL6 345 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 SNX6Q9UNH7 406 aa12.11□□□□□ -0.47
COL20A1-201ENST00000358894 PRORSD1PA6NEY8 169 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 RFXANKO14593 260 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 PRAMEF11O60813 436 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 GPIP06744 558 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 HSMCR30P0CW71 290 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 PTGER3P43115 390 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 HIST2H2ACQ16777 129 aaPredicted RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 HIST2H2AA3Q6FI13 130 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 SLC2A7Q6PXP3 512 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 UBE2R2Q712K3 238 aaPredicted RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 LYSMD3Q7Z3D4 306 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 AHI1Q8N157 1196 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 C3orf18Q9UK00 162 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 SCN1AP35498 2009 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 EPN2O95208 641 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 EFNA1P20827 205 aaPredicted RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 AQP1P29972 269 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CHI3L1P36222 383 aaPredicted RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 ADAM17P78536 824 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 TRAP1Q12931 704 aaKnown RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 IKBKEQ14164 716 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 PIGGQ5H8A4 983 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 BROXQ5VW32 411 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CD99L2Q8TCZ2 262 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 MRM3Q9HC36 420 aaKnown RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 HMG20AQ9NP66 347 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM30AQ9NV96 361 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CPQQ9Y646 472 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 A0A0U1RQS6 177 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 FAM20BO75063 409 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 PAPSS2O95340 614 aaPredicted RBP12.1□□□□□ -0.47
COL20A1-201ENST00000358894 ENTPD1P49961 510 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 ERVK-8P63133 956 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CERS6Q6ZMG9 384 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 GALNT5Q7Z7M9 940 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 POC5Q8NA72 575 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 GATA6Q92908 595 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CEP44Q9C0F1 390 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 CD84Q9UIB8 345 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 PCDHB1Q9Y5F3 818 aa12.1□□□□□ -0.47
COL20A1-201ENST00000358894 A0A0J9YVX5 310 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 PCP4L1A6NKN8 68 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 G3V2T6 193 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SLC28A1O00337 649 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 PPP6CO00743 305 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 CA12O43570 354 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 GJB5O95377 273 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 CD1DP15813 335 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 RPIAP49247 311 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SLC11A1P49279 550 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SMARCB1Q12824 385 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 ISCA2Q86U28 154 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 PROSER1Q86XN7 944 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 PYCR2Q96C36 320 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 GIN1Q9NXP7 522 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 NUDT4Q9NZJ9 180 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 DNAJC15Q9Y5T4 150 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SNX8Q9Y5X2 465 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 TOR1BO14657 336 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 FFAR2O15552 330 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 ALDH9A1P49189 494 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SEPHS1P49903 392 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SH3BP2P78314 561 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 ACOX1Q15067 660 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 ARHGAP15Q53QZ3 475 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 NT5C3BQ969T7 300 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 KIAA1191Q96A73 305 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 OTULINQ96BN8 352 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 C1orf74Q96LT6 269 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 CXorf21Q9HAI6 301 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 IDH2P48735 452 aaKnown RBP12.09□□□□□ -0.47
COL20A1-201ENST00000358894 MERTKQ12866 999 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SIM2Q14190 667 aaPredicted RBP12.09□□□□□ -0.47
COL20A1-201ENST00000358894 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms