RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 KLHDC8BQ8IXV7 354 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 ADGRG5Q8IZF4 528 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 CLYBLQ8N0X4 340 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 DHRSXQ8N5I4 330 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 PCDH20Q8N6Y1 951 aaKnown RBP3.95□□□□□ -1.78
CNGA1-201ENST00000358519 C1orf127Q8N9H9 656 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 FAM71DQ8N9W8 422 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 PIK3C3Q8NEB9 887 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 OR7A2PQ8NGA2 310 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 OR2T34Q8NGX1 318 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 ACTL9Q8TC94 416 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 HDAC2Q92769 488 aaKnown RBP3.95□□□□□ -1.78
CNGA1-201ENST00000358519 SEMA4DQ92854 862 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 TOP1MTQ969P6 601 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 NT5C3BQ969T7 300 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 ELMO3Q96BJ8 720 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 SUSD3Q96L08 255 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 DMRTB1Q96MA1 342 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 SLC2A13Q96QE2 648 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 TM9SF2Q99805 663 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 C17orf62Q9BQA9 187 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 TTYH2Q9BSA4 534 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 ZSCAN5AQ9BUG6 496 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 C1QTNF7Q9BXJ2 289 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 DGCR6LQ9BY27 220 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 MIR1-1HGQ9H1L0 117 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 PCIF1Q9H4Z3 704 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 SOX17Q9H6I2 414 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-201ENST00000358519 GPRC5CQ9NQ84 441 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 STARD7Q9NQZ5 370 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 FAM105AQ9NUU6 356 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 TMEM216Q9P0N5 145 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 ZC3H7BQ9UGR2 993 aaKnown RBP3.95□□□□□ -1.78
CNGA1-201ENST00000358519 VPS4AQ9UN37 437 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 AP3M1Q9Y2T2 418 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 YBX2Q9Y2T7 364 aaKnown RBP3.95□□□□□ -1.78
CNGA1-201ENST00000358519 PCDHGA7Q9Y5G6 932 aa3.95□□□□□ -1.78
CNGA1-201ENST00000358519 ARPC4-TTLL3A0A0A6YYG9 625 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TEX51A0A1B0GUA7 166 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 A0A1W2PQ45 241 aaPredicted RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 A0A1W2PQY0 241 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PRORSD1PA6NEY8 169 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TCAF2A6NFQ2 919 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 A8MV72 311 aaPredicted RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 H0Y858 1186 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PLK4O00444 970 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SLC9A3R1O14745 358 aaPredicted RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TBX1O43435 398 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 OAZ2O95190 189 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SEC24AO95486 1093 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SNAP29O95721 258 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 HSPA4LO95757 839 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PTTG1O95997 202 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 GFAPP14136 432 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 DDX6P26196 483 aaKnown RBP eCLIP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 GSTM2P28161 218 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 FMO4P31512 558 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 NOS2P35228 1153 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PPM1AP35813 382 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 EIF2DP41214 584 aaKnown RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 CDKN2BP42772 138 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 CBX5P45973 191 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 HTR3AP46098 478 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 ARCN1P48444 511 aaKnown RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PSMD8P48556 350 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SERPINB10P48595 397 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 ACLYP53396 1101 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 GP2P55259 537 aaKnown RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PSME3P61289 254 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 UBE3AQ05086 875 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TRAP1Q12931 704 aaKnown RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 GALNT3Q14435 633 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 YIF1BQ5BJH7 314 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TMEM236Q5W0B7 351 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TMEM198Q66K66 360 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TPGS2Q68CL5 300 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TXNRD3NBQ6F5E7 133 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PM20D1Q6GTS8 502 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 JADE1Q6IE81 842 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 ZNF544Q6NX49 715 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 FAM171BQ6P995 826 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 HFE2Q6ZVN8 426 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 BBS12Q6ZW61 710 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PAGE2Q7Z2X7 111 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 ADCK1Q86TW2 530 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PIGZQ86VD9 579 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 CMTR2Q8IYT2 770 aaKnown RBP3.94□□□□□ -1.78
CNGA1-201ENST00000358519 TCAIMQ8N3R3 496 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 CELF2-AS1Q8N7Q2 184 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 NAT16Q8N8M0 369 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 MCUQ8NE86 351 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 NDNFQ8TB73 568 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 PHOSPHO2Q8TCD6 241 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SPPL2BQ8TCT7 592 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SGCDQ92629 289 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 GTF2H4Q92759 462 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SH3KBP1Q96B97 665 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 SMARCD1Q96GM5 515 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 C1orf74Q96LT6 269 aa3.94□□□□□ -1.78
CNGA1-201ENST00000358519 C11orf84Q9BUA3 381 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms