RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MAGEB3O15480 346 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CHRM1P11229 460 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CYP3A5P20815 502 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CEBPGP53567 150 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RHDQ02161 417 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SLC25A52Q3SY17 297 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SMIM5Q71RC9 77 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF433Q8N7K0 673 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 C8orf48Q96LL4 319 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 NFKBIZQ9BYH8 718 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 NECTIN3Q9NQS3 549 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 EDARQ9UNE0 448 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 NR2E1Q9Y466 385 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 MSR1P21757 451 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 C1orf189Q5VU69 101 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RETSATQ6NUM9 610 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 FAM35AQ86V20 835 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RBFAQ8N0V3 343 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 FAM234BA2RU67 622 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PAPSS2O95340 614 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PTTG1O95997 202 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CYP2A6P11509 494 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJA1P31689 397 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 GRIA2P42262 883 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RBM34P42696 430 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 MOGSQ13724 837 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 VMACQ2NL98 169 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PAOXQ6QHF9 649 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM86AQ8N2M4 240 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RDH12Q96NR8 316 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PCDHB18PQ96TA0 734 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CST11Q9H112 138 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SDCBP2Q9H190 292 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PCDHB7Q9Y5E2 793 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 LRCH4O75427 683 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 HERVK_113P63132 956 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TLR1Q15399 786 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM44Q2T9K0 475 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 HECTD2Q5U5R9 776 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 LINGO2Q7L985 606 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SLC30A8Q8IWU4 369 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SRFBP1Q8NEF9 429 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PPCDCQ96CD2 204 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 GATA5Q9BWX5 397 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ERVK-6Q9BXR3 956 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 OSGEPL1Q9H4B0 414 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RAB23Q9ULC3 237 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PXDNQ92626 1479 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 LPOP22079 712 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MAPK9P45984 424 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 YAP1P46937 504 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SNIP1Q8TAD8 396 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 S100PBPQ96BU1 408 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 POLR2J2Q9GZM3 115 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 H3BM21 787 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CD97P48960 835 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MYBPC1Q00872 1141 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MADCAM1Q13477 382 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 PITRM1Q5JRX3 1037 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 EPGNQ6UW88 154 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 DCAKDQ8WVC6 231 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 FEM1CQ96JP0 617 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SLC35C2Q9NQQ7 365 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 DUOX1Q9NRD9 1551 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 H3BNH8 94 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 M0R036 132 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF182P17025 639 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SERPINA4P29622 427 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF81P51508 661 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 HSPA14Q0VDF9 509 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 RFTN1Q14699 578 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CERCAMQ5T4B2 595 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 PLCZ1Q86YW0 608 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 C4orf32Q8N8J7 132 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 BSNDQ8WZ55 320 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TNFRSF25Q93038 417 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM246Q9BRR3 403 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 NUSAP1Q9BXS6 441 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 IL1RAPQ9NPH3 570 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ST14Q9Y5Y6 855 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ALG5Q9Y673 324 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 GPR182O15218 404 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MAPK8P45983 427 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 NUMBP49757 651 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 AP2S1P53680 142 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 BCL2L1Q07817 233 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SLC27A1Q6PCB7 646 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ASB8Q9H765 288 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 PHRF1Q9P1Y6 1649 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 C12orf71A8MTZ7 269 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 hCG_2039718K7EN88 272 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TGFB1I1O43294 461 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 PRMT3O60678 531 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 RASAL1O95294 804 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MBL2P11226 248 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CES1P23141 567 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 STT3AP46977 705 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 HNRNPFP52597 415 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms