RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PHOX2BQ99453 314 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 BCL2L14Q9BZR8 327 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PDZD7Q9H5P4 517 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PLAC1Q9HBJ0 212 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 AUP1Q9Y679 476 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 COL1A2P08123 1366 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 MBLAC1A4D2B0 266 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 C4BPAP04003 597 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 HMGN1P05114 100 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PRKCGP05129 697 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 HMGCLP35914 325 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 GMPRP36959 345 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 GP5P40197 560 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 WDR5P61964 334 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 S100A12P80511 92 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 FAPQ12884 760 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZACNQ401N2 412 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 MROH9Q5TGP6 573 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SPRED1Q7Z699 444 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 HORMAD1Q86X24 394 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SYTL1Q8IYJ3 562 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 C12orf57Q99622 126 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SPOCK3Q9BQ16 436 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 NKX2-4Q9H2Z4 354 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCDH9Q9HC56 1237 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 IFT46Q9NQC8 304 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 IARS2Q9NSE4 1012 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 NUFIP1Q9UHK0 495 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TLK1Q9UKI8 766 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PNMA8BQ9ULN7 279 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 GMPPBQ9Y5P6 360 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 LINC00862A6NCI5 91 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF487B1APH4 448 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 F8W810 466 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 NEMP1O14524 444 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TRIM24O15164 1050 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SERPINE1P05121 402 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 MTHFD1P11586 935 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TCF4P15884 667 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF30P17039 623 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ALOX12P18054 663 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 FSHRP23945 695 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 LRPAP1P30533 357 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TRIM23P36406 574 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SERPINB10P48595 397 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 NRLP54845 237 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PSME3P61289 254 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 OLR1P78380 273 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 KCNJ11Q14654 390 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 FBXO43Q4G163 708 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLFN12LQ6IEE8 588 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 GDF6Q6KF10 455 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 DRICH1Q6PGQ1 229 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF767PQ75MW2 155 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 CAMKK1Q8N5S9 505 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 KIF12Q96FN5 646 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 FZD8Q9H461 694 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 DPP3Q9NY33 737 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 OPTCQ9UBM4 332 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLC23A1Q9UHI7 598 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TMEM5Q9Y2B1 443 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 AGAP5A6NIR3 686 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SULT1B1O43704 296 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 NRP2O60462 931 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 RASAL1O95294 804 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CSH1P0DML2 217 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CSH2P0DML3 217 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ACADMP11310 421 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CYP11B1P15538 503 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ATP6V1B2P21281 511 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCMT1P22061 227 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 HTR7P34969 479 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 GABRB2P47870 512 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 MFAP3P55082 362 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 MPP1Q00013 466 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 PTP4A2Q12974 167 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CSTF3Q12996 717 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 UGP2Q16851 508 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLC10A6Q3KNW5 377 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ALFQ53S48 1182 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 LAMTOR1Q6IAA8 161 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 BEND5Q7L4P6 421 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 NRARPQ7Z6K4 114 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 CMTR2Q8IYT2 770 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SLC7A6Q92536 515 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 RIT1Q92963 219 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 C11orf70Q9BRQ4 267 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF385DQ9H6B1 395 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 EFCAB1Q9HAE3 211 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 AGPAT4Q9NRZ5 378 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SMPD3Q9NY59 655 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SAE1Q9UBE0 346 aaPredicted RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 DRG1Q9Y295 367 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 STON1Q9Y6Q2 735 aa9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 PRRC2BQ5JSZ5 2229 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-202ENST00000358207 SCN1AP35498 2009 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms