RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 A8MT66 165 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 K7ERQ8 282 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 MUSKO15146 869 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 RASAL1O95294 804 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 PAPLNO95428 1278 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 STAMBPO95630 424 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 LAMP2P13473 410 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 GPX3P22352 226 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 RPL10P27635 214 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 CTSOP43234 321 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 CCT8P50990 548 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 RENBPP51606 427 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 DSC2Q02487 901 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 BNIP2Q12982 314 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 DHCR24Q15392 516 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 DENND5AQ6IQ26 1287 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 PRMT9Q6P2P2 845 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 MINDY1Q8N5J2 469 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 FAM110BQ8TC76 370 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 OSCP1Q8WVF1 389 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 RIPOR3Q96MK2 946 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 IL12RB2Q99665 862 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 TRMOQ9BU70 441 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 INTS6Q9UL03 887 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 WDR37Q9Y2I8 494 aa12.53□□□□□ -0.4
RTFDC1-202ENST00000357348 ANKRD36A6QL64 1941 aa12.52□□□□□ -0.4
RTFDC1-202ENST00000357348 MYO10Q9HD67 2058 aa12.52□□□□□ -0.4
RTFDC1-202ENST00000357348 NME4O00746 187 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 KDELR3O43731 214 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PMPCBO75439 489 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 GPC4O75487 556 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 SERPINB7O75635 380 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 CYP17A1P05093 508 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 GRIA3P42263 894 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 NAA20P61599 178 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 RELAQ04206 551 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 CTBP1Q13363 440 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 ZNF235Q14590 738 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 RAB39AQ14964 217 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 MOGQ16653 247 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 EML3Q32P44 896 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 USP51Q70EK9 711 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 TANKQ92844 425 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 CENPNQ96H22 339 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 TDRD1Q9BXT4 1180 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 GSTO2Q9H4Y5 243 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PDFQ9HBH1 243 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 TREX1Q9NSU2 369 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 MAP10Q9P2G4 905 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 VPS51Q9UID3 782 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 FCF1Q9Y324 198 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 DHRS12A0PJE2 317 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 NEMP2A6NFY4 417 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 SAC3D1A6NKF1 404 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 BOLA2-SMG1P6H3BVE0 249 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 BNIP3LO60238 219 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 SLC1A2P43004 574 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 CD151P48509 253 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 STK19P49842 368 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PRAMEP78395 509 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 INPP5AQ14642 412 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 TBCELQ5QJ74 424 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 KIAA0930Q6ICG6 404 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 SPATA6LQ8N4H0 392 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PAPD5Q8NDF8 572 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 IPMKQ8NFU5 416 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 ALG14Q96F25 216 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 ELMO2Q96JJ3 720 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 FCRL5Q96RD9 977 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 GLOD4Q9HC38 313 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 KIAA1522Q9P206 1035 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 AAR2Q9Y312 384 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 OR51B4Q9Y5P0 310 aa12.52□□□□□ -0.41
RTFDC1-202ENST00000357348 TMEM265A0A087WTH1 108 aa12.51□□□□□ -0.41
RTFDC1-202ENST00000357348 WISP3O95389 354 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms