RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DFFAO00273 331 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HOXC8P31273 242 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PTPRNQ16849 979 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 KLHL22Q53GT1 634 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZDHHC20Q5W0Z9 365 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 KANK2Q63ZY3 851 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PKN3Q6P5Z2 889 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 AKAP1Q92667 903 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 LENG9Q96B70 501 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZSWIM3Q96MP5 696 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 FOPNLQ96NB1 174 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 OR52B2Q96RD2 323 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 EGFL8Q99944 293 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 STRA6Q9BX79 667 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ADGRE3Q9BY15 652 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF395Q9H8N7 513 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PLCL2Q9UPR0 1127 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 INVSQ9Y283 1065 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CARNS1A5YM72 827 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ASB14A6NK59 587 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HTR1EP28566 365 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 UGT2B10P36537 528 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CAPZA1P52907 286 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF267Q14586 743 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PGM5Q15124 567 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SLC25A52Q3SY17 297 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 NHSL2Q5HYW2 709 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CXXC5Q7LFL8 322 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 THEM5Q8N1Q8 247 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ABCD2Q9UBJ2 740 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ATP6AP2A0A1C7CYW4 349 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ELOVL7A1L3X0 281 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SLC6A4P31645 630 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 EIF5AP63241 154 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CAMK2BQ13554 666 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PTGES3Q15185 160 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 DPY30Q9C005 99 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 LIN7BQ9HAP6 207 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 AASSQ9UDR5 926 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 NR2F6P10588 404 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 LHX1P48742 406 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF33BQ06732 778 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SYT16Q17RD7 645 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 MEDAGQ5VYS4 303 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 FAM83AQ86UY5 434 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 PTRH1Q86Y79 214 aaKnown RBP6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CADM2Q8N3J6 435 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRIM38-201ENST00000357085 KIFC1Q9BW19 673 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TFB2MQ9H5Q4 396 aaKnown RBP6.49□□□□□ -1.37
TRIM38-201ENST00000357085 MED11Q9P086 117 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 UBQLN2Q9UHD9 624 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 EGFL7Q9UHF1 273 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 GRID2O43424 1007 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CNTN5O94779 1100 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 FGFR1P11362 822 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 UBL4AP11441 157 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 HGFP14210 728 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 NOVP48745 357 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TAF6P49848 677 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 IL2P60568 153 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 PLIN5Q00G26 463 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 INCA1Q0VD86 236 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CDK10Q15131 360 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 HKDC1Q2TB90 917 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CAMKK1Q8N5S9 505 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 OR6B3Q8NGW1 331 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CERKQ8TCT0 537 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SEMA4DQ92854 862 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TMEM39AQ9NV64 488 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SARDHQ9UL12 918 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SSNA1O43805 119 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TMEM127O75204 238 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SORBS2O94875 1100 aaKnown RBP6.49□□□□□ -1.37
TRIM38-201ENST00000357085 PGK2P07205 417 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 VBP1P61758 197 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CNTN1Q12860 1018 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 PWP1Q13610 501 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 MAPKAPK3Q16644 382 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 LYSMD3Q7Z3D4 306 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TSPYL5Q86VY4 417 aaPredicted RBP6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CNTN4Q8IWV2 1026 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TTC29Q8NA56 475 aaPredicted RBP6.49□□□□□ -1.37
TRIM38-201ENST00000357085 DENND6BQ8NEG7 585 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 RHOXF1Q8NHV9 184 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 ADAM32Q8TC27 787 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SLC38A4Q969I6 547 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TRIB3Q96RU7 358 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 TSPAN16Q9UKR8 245 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 RIMKLBQ9ULI2 386 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SPATA2Q9UM82 520 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 SIPA1L1O43166 1804 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 CYBBP04839 570 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 ALDH2P05091 517 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 STOMP27105 288 aa6.49□□□□□ -1.37
TRIM38-201ENST00000357085 UGT2B15P54855 530 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms