RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 B3GALT6Q96L58 329 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 PER2O15055 1255 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 LDOC1O95751 146 aaPredicted RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 MXD1Q05195 221 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 NAE1Q13564 534 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 PPTC7Q8NI37 304 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 TFAP2BQ92481 460 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 ERLEC1Q96DZ1 483 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 IKZF2Q9UKS7 526 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 TESMINQ9Y4I5 508 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 EFCAB9A8MZ26 197 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 ATP6V1G1O75348 118 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 SNX4O95219 450 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 C22orf31O95567 290 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 TOMM20Q15388 145 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 SLC9B1Q4ZJI4 515 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 IFI44LQ53G44 452 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 PITRM1Q5JRX3 1037 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 RBM48Q5RL73 367 aaKnown RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 GPR20Q99678 358 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 HMX1Q9NP08 348 aaPredicted RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 FAM234BA2RU67 622 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 EI24O14681 340 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 IRF6O14896 467 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 GOT2P00505 430 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 LAPTM5Q13571 262 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 ZBED5Q49AG3 693 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PYROXD2Q8N2H3 581 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PHC3Q8NDX5 983 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 GPR152Q8TDT2 470 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PPP1R13LQ8WUF5 828 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 C1orf109Q9NX04 203 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 A0A1W2PQ67 120 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 FABP12A6NFH5 140 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 RIIAD1A6NNX1 92 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 TOR1BO14657 336 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 TBX1O43435 398 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 TMEM63AO94886 807 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 ITGA3P26006 1051 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 ALDH4A1P30038 563 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 CCNFP41002 786 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 RGS8P57771 180 aaPredicted RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 TUBA4AP68366 448 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 KIAA0930Q6ICG6 404 aaPredicted RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 SLC43A3Q8NBI5 491 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 TNFAIP8L1Q8WVP5 186 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 FAXDC2Q96IV6 333 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 LRRC3Q9BY71 257 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 SRSF11Q05519 484 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 NADK2Q4G0N4 442 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PEX5LQ8IYB4 626 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 SRFBP1Q8NEF9 429 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 ANKRA2Q9H9E1 313 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 C1RP00736 705 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PNLIPRP1P54315 467 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PCDH1Q08174 1060 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 DAG1Q14118 895 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 MED27Q6P2C8 311 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 ART5Q96L15 291 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 GFM1Q96RP9 751 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 KCNS3Q9BQ31 491 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 GOLGA2P5Q9HBQ8 144 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 EQTNQ9NQ60 294 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 EIF2B4Q9UI10 523 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 ESR1P03372 595 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 ATF6P18850 670 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 HNRNPDQ14103 355 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 GRB14Q14449 540 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 PRAMEF19Q5SWL8 479 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 JAZF1Q86VZ6 243 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 NAT8LQ8N9F0 302 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 SNX33Q8WV41 574 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 OR8D1Q8WZ84 308 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 GTPBP3Q969Y2 492 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 ZNF570Q96NI8 536 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 ZNF347Q96SE7 839 aa14.67□□□□□ -0.06
CHD4-201ENST00000357008 HNRNPABQ99729 332 aaKnown RBP14.67□□□□□ -0.06
CHD4-201ENST00000357008 TACR2P21452 398 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 ALDH3A2P51648 485 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 EEFSECP57772 596 aaKnown RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 FBXO48Q5FWF7 155 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 MAP1SQ66K74 1059 aaPredicted RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 KLHDC10Q6PID8 442 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 NIPA2Q8N8Q9 360 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 OR10H5Q8NGA6 315 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PIGXQ8TBF5 258 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 C8orf48Q96LL4 319 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 ZNF317Q96PQ6 595 aaPredicted RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 ATG10Q9H0Y0 220 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 TNKS2Q9H2K2 1166 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 NOBOXO60393 691 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PRAMEF1O95521 474 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 MT-CYBP00156 380 aaPredicted RBP14.66□□□□□ -0.06
CHD4-201ENST00000357008 SLURP2P0DP57 97 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 FAM174BQ3ZCQ3 159 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 PCDHAC1Q9H158 963 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 IL1RAPQ9NPH3 570 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 GMIPQ9P107 970 aa14.66□□□□□ -0.06
CHD4-201ENST00000357008 FZD10Q9ULW2 581 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms