RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PSMC3IPQ9P2W1 217 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 TMEFF2Q9UIK5 374 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 HCN2Q9UL51 889 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PCDHGC3Q9UN70 934 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 DUSP12Q9UNI6 340 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 KANSL1LA0AUZ9 987 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TMEM189-UBE2V1I3L0A0 370 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 B3GAT3O94766 335 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FESP07332 822 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 EIF4BP23588 611 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 CCR2P41597 374 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NCS1P62166 190 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 B4GALNT1Q00973 533 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC14A2Q15849 920 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 UNC50Q53HI1 259 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 C1orf146Q5VVC0 180 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GTF2IRD2BQ6EKJ0 949 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FAM117BQ6P1L5 589 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 DDX53Q86TM3 631 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 GTF2IRD2Q86UP8 949 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 B3GALNT2Q8NCR0 500 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CNIH3Q8TBE1 160 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FAM174AQ8TBP5 190 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 RDH11Q8TC12 318 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 HM13Q8TCT9 377 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MICU1Q9BPX6 476 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 INPP5KQ9BT40 448 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 RPP25Q9BUL9 199 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 SORBS1Q9BX66 1292 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 TM6SF2Q9BZW4 377 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CDH19Q9H159 772 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PARVAQ9NVD7 372 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CLDN24A6NM45 220 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 C2CD4DB7Z1M9 353 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GABRDO14764 452 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 AKAP10O43572 662 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PABPC4LP0CB38 370 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 HOXA9P31269 272 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NR4A2P43354 598 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NAMPTP43490 491 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GABRB2P47870 512 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GLUD2P49448 558 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NR0B1P51843 470 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 RAP1GDS1P52306 607 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CAV3P56539 151 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MORF4L2Q15014 288 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 KIAA0040Q15053 153 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FUT11Q495W5 492 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FAM171A1Q5VUB5 890 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TMEM236Q5W0B7 351 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SYT9Q86SS6 491 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TRIM74Q86UV6 250 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CADM3Q8N126 398 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC15A4Q8N697 577 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CCDC89Q8N998 374 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 ZBTB44Q8NCP5 570 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 ICA1LQ8NDH6 482 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC6A18Q96N87 628 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 VRTNQ9H8Y1 702 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TRPV4Q9HBA0 871 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 DPP3Q9NY33 737 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NOP53Q9NZM5 478 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 IL20RAQ9UHF4 553 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 AKT3Q9Y243 479 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 IPPQ9Y573 584 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GOLGA6L10A0A0M3HER8 536 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GOLGA6L10A6NI86 522 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MIF4GDA9UHW6 222 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 K7ESM1 405 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FFAR3O14843 346 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GPR42O15529 346 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 FOSP01100 380 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 ESRRAP11474 423 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 MCM3P25205 808 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MAN1A1P33908 653 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MAP2K4P45985 399 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC18A1P54219 525 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SRSF11Q05519 484 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC12A1Q13621 1099 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TFDP2Q14188 446 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TSNAXIP1Q2TAA8 658 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 GRAMD1BQ3KR37 738 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CARD16Q5EG05 197 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 ZNF470Q6ECI4 717 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC26A11Q86WA9 606 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NIPA2Q8N8Q9 360 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 HTR3CQ8WXA8 447 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 RAB34Q9BZG1 259 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 C6orf106Q9H6K1 298 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 AGAP14A8MT82 685 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 H3BM21 787 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 J3KTA2 159 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 F11P03951 625 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 CYBBP04839 570 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 DARSP14868 501 aaKnown RBP5.54□□□□□ -1.52
CD47-201ENST00000355354 LHCGRP22888 699 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 HTR1BP28222 390 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 PCK1P35558 622 aa5.54□□□□□ -1.52
CD47-201ENST00000355354 FDFT1P37268 417 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms