RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SPATC1LQ9H0A9 340 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 KCTD5Q9NXV2 234 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MALT1Q9UDY8 824 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MRPL42Q9Y6G3 142 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAU2Q9Y6X3 613 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 AGLP35573 1532 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAGEB17A8MXT2 336 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM189A1O60320 539 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 PIRTP0C851 137 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNAJA1P31689 397 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADRA1BP35368 520 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 HID1Q8IV36 788 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC37A3Q8NCC5 494 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MFSD3Q96ES6 412 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 AURKBQ96GD4 344 aaPredicted RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 LIN28AQ9H9Z2 209 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 SMURF2Q9HAU4 748 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 OXSMQ9NWU1 459 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 NOCTQ9UK39 431 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ALG5Q9Y673 324 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 GADD45GO95257 159 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CXCR3P49682 368 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 GMPSP49915 693 aaPredicted RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CAPSQ13938 189 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 SYT16Q17RD7 645 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF248Q8NDW4 579 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MTIF3Q9H2K0 278 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 TNKS2Q9H2K2 1166 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MMP27Q9H306 513 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 NECTIN3Q9NQS3 549 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 AGO1Q9UL18 857 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 INMTO95050 263 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 GPD2P43304 727 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CHSY3Q70JA7 882 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 PIGXQ8TBF5 258 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 FGFBP2Q9BYJ0 223 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CCSER2Q9H7U1 834 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ACTR3BQ9P1U1 418 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 C9JVG2 144 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ERAL1O75616 437 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PFKPQ01813 784 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 GTF2H2Q13888 395 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 GTF2H2CQ6P1K8 395 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 RTL4Q6ZR62 310 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 LINGO2Q7L985 606 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PLEKHH3Q7Z736 793 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 LIX1Q8N485 282 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ING5Q8WYH8 240 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 AKAP1Q92667 903 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 LRRC58Q96CX6 371 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 HTATIP2Q9BUP3 242 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 RC3H2Q9HBD1 1191 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF214Q9UL59 606 aaPredicted RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 NME6O75414 186 aaPredicted RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC25A12O75746 678 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 RPL9P32969 192 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 VSIG10LQ86VR7 867 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 MARVELD2Q8N4S9 558 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 NAT8LQ8N9F0 302 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMBIM1Q969X1 311 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZFP3Q96NJ6 502 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PGLYRP2Q96PD5 576 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM124BQ9H5Z6 455 aaPredicted RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 SMPD4Q9NXE4 827 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNMT3LQ9UJW3 386 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 LOC100130705A0A1B0GUX0 176 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ABHD14A-ACY1A0A1B0GW23 586 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 EIF2S3P41091 472 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADAM15Q13444 863 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF181Q2M3W8 571 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 HSD17B12Q53GQ0 312 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 C15orf40Q8WUR7 153 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 XKR8Q9H6D3 395 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAB21L2Q9Y586 359 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 SRSF11Q05519 484 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 EIF5AL1Q6IS14 154 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM117BQ6P1L5 589 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 CERS6Q6ZMG9 384 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 RFT1Q96AA3 541 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ART5Q96L15 291 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 MIOSQ9NXC5 875 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 MEMO1Q9Y316 297 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRIM3O75382 744 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms