RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ACSS2Q9NR19 701 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 TAPBPO15533 448 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 ENO1P06733 434 aaKnown RBP16.93■□□□□ 0.3
VPS13B-201ENST00000355155 UROSP10746 265 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 EPHA3P29320 983 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 CCR3P51677 355 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 LONP2Q86WA8 852 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 SFTPA1Q8IWL2 248 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 RHBDF1Q96CC6 855 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 ZNF225Q9UK10 706 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 FNDC3AQ9Y2H6 1198 aaKnown RBP16.93■□□□□ 0.3
VPS13B-201ENST00000355155 FADS3Q9Y5Q0 445 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 DNAJC15Q9Y5T4 150 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 SNX2O60749 519 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 KIR2DL1P43626 348 aaPredicted RBP16.92■□□□□ 0.3
VPS13B-201ENST00000355155 SEMG2Q02383 582 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 PCDH1Q08174 1060 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GRIK2Q13002 908 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GRM2Q14416 872 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 SQLEQ14534 574 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 PIP5KL1Q5T9C9 394 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 PARP9Q8IXQ6 854 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 ASB11Q8WXH4 323 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 FAM136AQ96C01 138 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 C19orf60Q96EN9 201 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 KXD1Q9BQD3 176 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 APOL5Q9BWW9 433 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 MYO7AQ13402 2215 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 TBC1D3BA6NDS4 549 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 TRIM16O95361 564 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 THRAP10827 490 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 COX4I1P13073 169 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 PIK3R1P27986 724 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GDI1P31150 447 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 ACADVLP49748 655 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 SERPINA13PQ6UXR4 307 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 ARHGAP24Q8N264 748 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 RBM15BQ8NDT2 890 aaKnown RBP16.92■□□□□ 0.3
VPS13B-201ENST00000355155 DCUN1D1Q96GG9 259 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 NSUN5Q96P11 429 aaKnown RBP16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GABRG3Q99928 467 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 ZNF576Q9H609 170 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 CD274Q9NZQ7 290 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 ADAMTS6Q9UKP5 1117 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 MTCH2Q9Y6C9 303 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 PIKFYVEQ9Y2I7 2098 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 LRRC14BA6NHZ5 514 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GYG2O15488 501 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 LILRB5O75023 590 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 MATN4O95460 622 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 HLA-EP13747 358 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 VCLP18206 1134 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 COPAP53621 1224 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 DLX2Q07687 328 aaPredicted RBP16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GRIN2CQ14957 1233 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 PDCD2Q16342 344 aaPredicted RBP16.92■□□□□ 0.3
VPS13B-201ENST00000355155 SMU1Q2TAY7 513 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 EGFLAMQ63HQ2 1017 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 FBXO15Q8NCQ5 510 aaPredicted RBP16.92■□□□□ 0.3
VPS13B-201ENST00000355155 DLG3Q92796 817 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 GLMNQ92990 594 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 SCAMP4Q969E2 229 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 TMEM79Q9BSE2 394 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 MID1IP1Q9NPA3 183 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 STON1Q9Y6Q2 735 aa16.92■□□□□ 0.3
VPS13B-201ENST00000355155 B2RBV5 119 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 E9PBE3 544 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 KPNA3O00505 521 aaPredicted RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 KLHL41O60662 606 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 ADH1BP00325 375 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 KHDC1Q4VXA5 237 aaKnown RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 LRRC73Q5JTD7 316 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 FBXW10Q5XX13 1052 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 RPS27LQ71UM5 84 aaKnown RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 SYVN1Q86TM6 617 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 FAM13CQ8NE31 585 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 NTMT1Q9BV86 223 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 CD244Q9BZW8 370 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 SARS2Q9NP81 518 aaKnown RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 COPG1Q9Y678 874 aaKnown RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 SLC5A10A0PJK1 596 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 SERTM1A2A2V5 107 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 K7EQS6 105 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 TM7SF2O76062 418 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 S100BP04271 92 aaPredicted RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 MSH3P20585 1137 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 PIK3CGP48736 1102 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 NAIF1Q69YI7 327 aaPredicted RBP16.91■□□□□ 0.3
VPS13B-201ENST00000355155 ADAMTSL4Q6UY14 1074 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 TRPC4APQ8TEL6 797 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 TWIST2Q8WVJ9 160 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 AP2M1Q96CW1 435 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 TUBB1Q9H4B7 451 aa16.91■□□□□ 0.3
VPS13B-201ENST00000355155 DCXO43602 365 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 ATP6V1G2O95670 118 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 P2RY2P41231 377 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 AGTR2P50052 363 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 HNMTP50135 292 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 METAP1P53582 386 aa16.9■□□□□ 0.3
VPS13B-201ENST00000355155 PGM2L1Q6PCE3 622 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms