RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TRIM55Q9BYV6 548 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 LHX9Q9NQ69 397 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 HACD3Q9P035 362 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 KLHL8Q9P2G9 620 aaPredicted RBP15.51■□□□□ 0.07
PDGFA-201ENST00000354513 ANKMY1Q9P2S6 941 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 INTUQ9ULD6 942 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 POLHQ9Y253 713 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 PLAAQ9Y263 795 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 ALG6Q9Y672 507 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 CCDC88CQ9P219 2028 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 SPTBP11277 2137 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 CDC14CA4D256 554 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 OR5K3A6NET4 321 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 KCNJ13O60928 360 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 KATNA1O75449 491 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 CREG1O75629 220 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 DNAJB5O75953 348 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 MTHFD1P11586 935 aaKnown RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 VCLP18206 1134 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 HLA-DPA1P20036 260 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 HALP42357 657 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 PMS2P54278 862 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 RPS18P62269 152 aaKnown RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 MSLNQ13421 630 aaPredicted RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 UBAP2LQ14157 1087 aaKnown RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 METRNLQ641Q3 311 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 CCDC70Q6NSX1 233 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 KATNAL2Q8IYT4 538 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 LILRA3Q8N6C8 439 aaPredicted RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 UBXN4Q92575 508 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 KRT35Q92764 455 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 RMDN2Q96LZ7 410 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 WWP1Q9H0M0 922 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 ZNHIT6Q9NWK9 470 aaKnown RBP15.5■□□□□ 0.07
PDGFA-201ENST00000354513 ARL5AQ9Y689 179 aa15.5■□□□□ 0.07
PDGFA-201ENST00000354513 AGTP01019 485 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 ADRA1AP35348 466 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 KLRB1Q12918 225 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 MPP3Q13368 585 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 IL10RAQ13651 578 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 PPP2R5EQ16537 467 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 TFDP3Q5H9I0 405 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 FNBP1LQ5T0N5 605 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 ZDHHC20Q5W0Z9 365 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 CPZQ66K79 652 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 TCTN3Q6NUS6 607 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 FAM199XQ6PEV8 388 aaPredicted RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 FBXO38Q6PIJ6 1188 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 DET1Q7L5Y6 550 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 PID1Q7Z2X4 250 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 D2HGDHQ8N465 521 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 SIDT2Q8NBJ9 832 aaKnown RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 ZNF514Q96K75 400 aaPredicted RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 ZCCHC2Q9C0B9 1178 aaKnown RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 GBA3Q9H227 469 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 ACTL8Q9H568 366 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 IMP3Q9NV31 184 aaKnown RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 TLK1Q9UKI8 766 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 RARRES3Q9UL19 164 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 PADI1Q9ULC6 663 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 DNMT3AQ9Y6K1 912 aaPredicted RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 NBASA2RRP1 2371 aa15.49■□□□□ 0.07
PDGFA-201ENST00000354513 USP9XQ93008 2570 aaPredicted RBP15.49■□□□□ 0.07
PDGFA-201ENST00000354513 TLCD2A6NGC4 264 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 MTSS1O43312 755 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 PRAMEF1O95521 474 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 RECKO95980 971 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 NTRK1P04629 796 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 RBL1P28749 1068 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 CDC25BP30305 580 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 CD97P48960 835 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 KPNA2P52292 529 aaKnown RBP15.48■□□□□ 0.07
PDGFA-201ENST00000354513 XIAPP98170 497 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 ITGA9Q13797 1035 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 SEPT6Q14141 434 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 BBS12Q6ZW61 710 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 BZW1Q7L1Q6 419 aaKnown RBP15.48■□□□□ 0.07
PDGFA-201ENST00000354513 DAAM2Q86T65 1068 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 APLFQ8IW19 511 aaPredicted RBP15.48■□□□□ 0.07
PDGFA-201ENST00000354513 SLC38A9Q8NBW4 561 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 P3H4Q92791 437 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 ZNF501Q96CX3 271 aaPredicted RBP15.48■□□□□ 0.07
PDGFA-201ENST00000354513 TTC25Q96NG3 672 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 VAT1Q99536 393 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 NRTNQ99748 197 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 FICDQ9BVA6 458 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 TWSG1Q9GZX9 223 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 FGF21Q9NSA1 209 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDGFA-201ENST00000354513 RSPH14Q9UHP6 348 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 SLC24A2Q9UI40 661 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 FKBPLQ9UIM3 349 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 KCND3Q9UK17 655 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 PCDHB3Q9Y5E6 796 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 LRRK2Q5S007 2527 aa15.48■□□□□ 0.07
PDGFA-201ENST00000354513 PCM1Q15154 2024 aa15.47■□□□□ 0.07
PDGFA-201ENST00000354513 MGAT4DA6NG13 374 aa15.47■□□□□ 0.07
PDGFA-201ENST00000354513 AGAP14A8MT82 685 aa15.47■□□□□ 0.07
PDGFA-201ENST00000354513 HACD1B0YJ81 288 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms