RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF501Q96CX3 271 aaPredicted RBP15.49■□□□□ 0.07
DDX55-202ENST00000354291 THAP2Q9H0W7 228 aa15.49■□□□□ 0.07
DDX55-202ENST00000354291 ZNF552Q9H707 407 aaPredicted RBP15.49■□□□□ 0.07
DDX55-202ENST00000354291 TRIM39Q9HCM9 518 aa15.49■□□□□ 0.07
DDX55-202ENST00000354291 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.49■□□□□ 0.07
DDX55-202ENST00000354291 DTLQ9NZJ0 730 aa15.49■□□□□ 0.07
DDX55-202ENST00000354291 DNPEPQ9ULA0 475 aa15.49■□□□□ 0.07
DDX55-202ENST00000354291 ADGRG1Q9Y653 693 aa15.49■□□□□ 0.07
DDX55-202ENST00000354291 A0A1B0GUH1 482 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 MYO1FO00160 1098 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 CYP1A2P05177 515 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 CAPN1P07384 714 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 RARAP10276 462 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 COX6B1P14854 86 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 AMPD1P23109 780 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 SERPINB6P35237 376 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 PTGER4P35408 488 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 ART3Q13508 389 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 ALKBH5Q6P6C2 394 aaKnown RBP15.48■□□□□ 0.07
DDX55-202ENST00000354291 KLHL35Q6PF15 583 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 LRRTM4Q86VH4 590 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 OR8K5Q8NH50 307 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 CCHCR1Q8TD31 782 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 GRHL3Q8TE85 626 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 FER1L6-AS2Q96M78 137 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 LRFN5Q96NI6 719 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 CSPG4P5Q96PW8 444 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 NUP85Q9BW27 656 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 SPATA16Q9BXB7 569 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 PKD2L2Q9NZM6 624 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 ANAPC7Q9UJX3 599 aa15.48■□□□□ 0.07
DDX55-202ENST00000354291 SPG11Q96JI7 2443 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 A0A087X0T9 212 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 MASP2O00187 686 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 LDB2O43679 373 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 KLHL41O60662 606 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 LCA5LO95447 670 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 TPM3P06753 285 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 FAM228BP0C875 321 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 EDN3P14138 238 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 TCF4P15884 667 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 FECHP22830 423 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 PLCL1Q15111 1095 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 HADHQ16836 314 aaKnown RBP15.47■□□□□ 0.07
DDX55-202ENST00000354291 PTCHD3Q3KNS1 767 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 ANKRD20A8PQ5CZ79 823 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 ALS2CLQ60I27 953 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 LRRC49Q8IUZ0 686 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 PARP9Q8IXQ6 854 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 RAVER1Q8IY67 606 aaKnown RBP15.47■□□□□ 0.07
DDX55-202ENST00000354291 SYTL1Q8IYJ3 562 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 ATPAF2Q8N5M1 289 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 LPCAT1Q8NF37 534 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 PCDH18Q9HCL0 1135 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 ETNK2Q9NVF9 386 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 HRASLS2Q9NWW9 162 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 SOHLH2Q9NX45 425 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 WDR37Q9Y2I8 494 aa15.47■□□□□ 0.07
DDX55-202ENST00000354291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.47■□□□□ 0.077e-7■■□□□ 13.9
DDX55-202ENST00000354291 TLCD2A6NGC4 264 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 PEX12O00623 359 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 E2F3O00716 465 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 CHUKO15111 745 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 MTX2O75431 263 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 IPO13O94829 963 aaKnown RBP15.46■□□□□ 0.07
DDX55-202ENST00000354291 HALP42357 657 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 CDH6P55285 790 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 IHHQ14623 411 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 HIF1AQ16665 826 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 ZNF569Q5MCW4 686 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 DCAF10Q5QP82 559 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 AGAP9Q5VTM2 703 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 FBXO38Q6PIJ6 1188 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 FAM198BQ6UWH4 519 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 WASH2PQ6VEQ5 465 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 SPOCD1Q6ZMY3 1216 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 MRGPREQ86SM8 312 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 FAR1Q8WVX9 515 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 TRAPPC9Q96Q05 1148 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 TIMM29Q9BSF4 260 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 SLC7A5P2Q9GIP4 190 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 PCMTD2Q9NV79 361 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 IFNKQ9P0W0 207 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 TTLL3Q9Y4R7 772 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 CSAG2Q9Y5P2 127 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 KLF2Q9Y5W3 355 aaPredicted RBP15.46■□□□□ 0.07
DDX55-202ENST00000354291 DNHD1Q96M86 4753 aa15.46■□□□□ 0.07
DDX55-202ENST00000354291 RGSL1A5PLK6 1076 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 GPR89AB7ZAQ6 455 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 CDK14O94921 469 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 ZBTB11O95625 1053 aaPredicted RBP15.45■□□□□ 0.06
DDX55-202ENST00000354291 PRLP01236 227 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 GYPCP04921 128 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 STSP08842 583 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 GPR89BP0CG08 455 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 HTR1EP28566 365 aa15.45■□□□□ 0.06
DDX55-202ENST00000354291 RORAP35398 523 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms