RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 SYDE1Q6ZW31 735 aaPredicted RBP21.65■■□□□ 1.06
SNX3-202ENST00000349379 PIM3Q86V86 326 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 LILRA3Q8N6C8 439 aaPredicted RBP21.65■■□□□ 1.06
SNX3-202ENST00000349379 PRR11Q96HE9 360 aaPredicted RBP21.65■■□□□ 1.06
SNX3-202ENST00000349379 DPYSL5Q9BPU6 564 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 EPB41L1Q9H4G0 881 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 SLC40A1Q9NP59 571 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 PCDHGA8Q9Y5G5 932 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 QSOX1O00391 747 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 VIPP01282 170 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 MPOP05164 745 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 HALP42357 657 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 GABREP78334 506 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 EIF3IQ13347 325 aaKnown RBP21.64■■□□□ 1.05
SNX3-202ENST00000349379 RPE65Q16518 533 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 ST3GAL2Q16842 350 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 FASTKD1Q53R41 847 aaKnown RBP21.64■■□□□ 1.05
SNX3-202ENST00000349379 NKAIN2Q5VXU1 208 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 USP53Q70EK8 1073 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 KLHL7Q8IXQ5 586 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 RBM12BQ8IXT5 1001 aaKnown RBP21.64■■□□□ 1.05
SNX3-202ENST00000349379 AGGF1Q8N302 714 aaeCLIP21.64■■□□□ 1.05
SNX3-202ENST00000349379 OR4D9Q8NGE8 314 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 OR10G6Q8NH81 332 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 CCM2Q9BSQ5 444 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 TBC1D10AQ9BXI6 508 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 SEMA6CQ9H3T2 930 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 COG4Q9H9E3 785 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 VPS37BQ9H9H4 285 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 CATSPERZQ9NTU4 200 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 MARCH4Q9P2E8 410 aaPredicted RBP21.64■■□□□ 1.05
SNX3-202ENST00000349379 PDP2Q9P2J9 529 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 ASIC3Q9UHC3 531 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 ZMIZ1Q9ULJ6 1067 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 SATB2Q9UPW6 733 aa21.64■■□□□ 1.05
SNX3-202ENST00000349379 PRAMEF33A0A0G2JMD5 474 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 FAM237BA0A1B0GVD1 139 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 GOLGA8MH3BSY2 632 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 DUX1O43812 170 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 BRINP1O60477 761 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 HOXB3P14651 431 aaPredicted RBP21.63■■□□□ 1.05
SNX3-202ENST00000349379 CASQ1P31415 396 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 LIMK2P53671 638 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 C3orf38Q5JPI3 329 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 AARS2Q5JTZ9 985 aaKnown RBP21.63■■□□□ 1.05
SNX3-202ENST00000349379 KIAA0930Q6ICG6 404 aaPredicted RBP21.63■■□□□ 1.05
SNX3-202ENST00000349379 CAPRIN2Q6IMN6 1127 aaKnown RBP21.63■■□□□ 1.05
SNX3-202ENST00000349379 TMEM71Q6P5X7 295 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 CES3Q6UWW8 571 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 SYT10Q6XYQ8 523 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 HOOK3Q86VS8 718 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 JAMLQ86YT9 394 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 TRIM48Q8IWZ4 208 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 CFAP206Q8IYR0 622 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 GPR150Q8NGU9 434 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 WDR36Q8NI36 951 aaKnown RBP21.63■■□□□ 1.05
SNX3-202ENST00000349379 RMDN2Q96LZ7 410 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 TTC1Q99614 292 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 STRADBQ9C0K7 418 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 WWP1Q9H0M0 922 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 PSMD13Q9UNM6 376 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 AK5Q9Y6K8 562 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 EPG5Q9HCE0 2579 aa21.63■■□□□ 1.05
SNX3-202ENST00000349379 URB1O60287 2271 aaKnown RBP21.63■■□□□ 1.05
SNX3-202ENST00000349379 IGHV5-10-1A0A0J9YXX1 117 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 SDR42E2A6NKP2 422 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 CD3EAPO15446 510 aaKnown RBP21.62■■□□□ 1.05
SNX3-202ENST00000349379 OR1I1O60431 355 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 MTHFD1P11586 935 aaKnown RBP21.62■■□□□ 1.05
SNX3-202ENST00000349379 ARCN1P48444 511 aaKnown RBP21.62■■□□□ 1.05
SNX3-202ENST00000349379 DR1Q01658 176 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 WDR74Q6RFH5 385 aaPredicted RBP21.62■■□□□ 1.05
SNX3-202ENST00000349379 PCGF5Q86SE9 256 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 TMEM135Q86UB9 458 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 LSMEM2Q8N112 164 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 SPDYE1Q8NFV5 336 aaPredicted RBP21.62■■□□□ 1.05
SNX3-202ENST00000349379 CXorf40BQ96DE9 158 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 SIGLEC10Q96LC7 697 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 INSM2Q96T92 566 aaPredicted RBP21.62■■□□□ 1.05
SNX3-202ENST00000349379 OR52A5Q9H2C5 316 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 EPB41L5Q9HCM4 733 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 ASCL3Q9NQ33 180 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 OGFRQ9NZT2 677 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 ADAMTS20P59510 1910 aa21.62■■□□□ 1.05
SNX3-202ENST00000349379 MAGEB16A2A368 324 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 PMS2P1A4D2B8 440 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 THRAP10827 490 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 PPARGP37231 505 aaPredicted RBP21.61■■□□□ 1.05
SNX3-202ENST00000349379 MLLT3P42568 568 aaPredicted RBP21.61■■□□□ 1.05
SNX3-202ENST00000349379 TTPAP49638 278 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 RPA4Q13156 261 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 TRA2AQ13595 282 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNX3-202ENST00000349379 DHX34Q14147 1143 aaKnown RBP21.61■■□□□ 1.05
SNX3-202ENST00000349379 GPR18Q14330 331 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 TBC1D25Q3MII6 688 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 RAB11FIP2Q7L804 512 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 LDB1Q86U70 411 aaPredicted RBP21.61■■□□□ 1.05
SNX3-202ENST00000349379 TMEM159Q96B96 161 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 AHCYL2Q96HN2 611 aaKnown RBP21.61■■□□□ 1.05
SNX3-202ENST00000349379 FCRL3Q96P31 734 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms