RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 RNF10Q8N5U6 811 aaKnown RBP13.02□□□□□ -0.33
CLCC1-202ENST00000348264 ZNF514Q96K75 400 aaPredicted RBP13.02□□□□□ -0.33
CLCC1-202ENST00000348264 FAM96AQ9H5X1 160 aa13.02□□□□□ -0.33
CLCC1-202ENST00000348264 LRRC40Q9H9A6 602 aa13.02□□□□□ -0.33
CLCC1-202ENST00000348264 FEZ2Q9UHY8 353 aaPredicted RBP13.02□□□□□ -0.33
CLCC1-202ENST00000348264 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.33
CLCC1-202ENST00000348264 DNMT3AQ9Y6K1 912 aaPredicted RBP13.02□□□□□ -0.33
CLCC1-202ENST00000348264 MGAT4DA6NG13 374 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 RAD1O60671 282 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 AP2A1O95782 977 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 PRSS56P0CW18 603 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 TPH1P17752 444 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 ITGALP20701 1170 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 MC4RP32245 332 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 PRLHRP49683 370 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 SEPHS1P49903 392 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 CDKN1CP49918 316 aaPredicted RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 GSDMDP57764 484 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 CYP4F2P78329 520 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 C19orf57Q0VDD7 668 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 SEPT6Q14141 434 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 POU6F1Q14863 301 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 OASLQ15646 514 aaKnown RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 P3H1Q32P28 736 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 SEL1L2Q5TEA6 688 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 CEACAM20Q6UY09 585 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 PRSS42Q7Z5A4 293 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 SNX20Q7Z614 316 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 LILRA3Q8N6C8 439 aaPredicted RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 ULK4Q96C45 1275 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 RNF31Q96EP0 1072 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 RMDN2Q96LZ7 410 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 C19orf43Q9BQ61 176 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 TSGA10Q9BZW7 698 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 SPRY4Q9C004 299 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 WWP1Q9H0M0 922 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 FBXO8Q9NRD0 319 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 IMP3Q9NV31 184 aaKnown RBP13.01□□□□□ -0.33
CLCC1-202ENST00000348264 PILRAQ9UKJ1 303 aa13.01□□□□□ -0.33
CLCC1-202ENST00000348264 TRBV5-4A0A0C4DH59 114 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 LIASO43766 372 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 KRT86O43790 486 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 RASSF9O75901 435 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 LIFP15018 202 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 HADHAP40939 763 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 SH3BP2P78314 561 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 LINC00303Q3SY05 128 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 IRGCQ6NXR0 463 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 FAM92BQ6ZTR7 304 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 TIPARPQ7Z3E1 657 aaKnown RBP13□□□□□ -0.33
CLCC1-202ENST00000348264 SLC13A5Q86YT5 568 aaPredicted RBP13□□□□□ -0.33
CLCC1-202ENST00000348264 IL22RA1Q8N6P7 574 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 OR2L2Q8NH16 312 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 EXTL1Q92935 676 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 LRRC45Q96CN5 670 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 DCUN1D1Q96GG9 259 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 LINC00615Q96LM1 132 aaPredicted RBP13□□□□□ -0.33
CLCC1-202ENST00000348264 INSM2Q96T92 566 aaPredicted RBP13□□□□□ -0.33
CLCC1-202ENST00000348264 COPS8Q99627 209 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 NLE1Q9NVX2 485 aaPredicted RBP13□□□□□ -0.33
CLCC1-202ENST00000348264 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
CLCC1-202ENST00000348264 SEC16AO15027 2179 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 IGLV3-16A0A075B6K0 115 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 CCDC78A2IDD5 438 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 H7C0S8 307 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 POLR1CO15160 346 aaPredicted RBP12.99□□□□□ -0.33
CLCC1-202ENST00000348264 TOX3O15405 576 aaPredicted RBP12.99□□□□□ -0.33
CLCC1-202ENST00000348264 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 STK17BO94768 372 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 DLGAP3O95886 979 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 RALBP11234 206 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 ACRV1P26436 265 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 FOXM1Q08050 763 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 PLCL1Q15111 1095 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 CACHD1Q5VU97 1274 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 PRUNE1Q86TP1 453 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 PIANPQ8IYJ0 282 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 C1orf54Q8WWF1 131 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 C12orf66Q96MD2 445 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 ZPBPQ9BS86 351 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 SLC12A9Q9BXP2 914 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 RAB33BQ9H082 229 aa12.99□□□□□ -0.33
CLCC1-202ENST00000348264 TMEM184BQ9Y519 407 aaPredicted RBP12.99□□□□□ -0.33
CLCC1-202ENST00000348264 SNRNP200O75643 2136 aaKnown RBP12.98□□□□□ -0.33
CLCC1-202ENST00000348264 KLHL33A6NCF5 533 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 MROH6A6NGR9 719 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 CFAP99D6REC4 459 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 IFNB1P01574 187 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 ITGB2P05107 769 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 POLBP06746 335 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 SLC35G4P0C7Q5 338 aa12.98□□□□□ -0.33
CLCC1-202ENST00000348264 ATP1B2P14415 290 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms