RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SLC35F5Q8WV83 523 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 C17orf50Q8WW18 174 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 TRIM39Q9HCM9 518 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 DNAJC28Q9NX36 388 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 ANKRD26Q9UPS8 1709 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 NEMP2A6NFY4 417 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 PIP5K1BO14986 540 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 F7P08709 466 aaPredicted RBP18.39■□□□□ 0.53
UBE3C-201ENST00000348165 DBTP11182 482 aaKnown RBP18.39■□□□□ 0.53
UBE3C-201ENST00000348165 ZNF24P17028 368 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 OGNP20774 298 aaKnown RBP18.39■□□□□ 0.53
UBE3C-201ENST00000348165 RBM44Q6ZP01 1051 aaKnown RBP18.39■□□□□ 0.53
UBE3C-201ENST00000348165 TDRPQ86YL5 185 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 HDDC3Q8N4P3 179 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 CIB1Q99828 191 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 FBXW2Q9UKT8 454 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 G3V2T6 193 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 CCL5P13501 91 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 ACVRL1P37023 503 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 CARD16Q5EG05 197 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 ARMC3Q5W041 872 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 UNC5BQ8IZJ1 945 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 OSBPL11Q9BXB4 747 aa18.39■□□□□ 0.53
UBE3C-201ENST00000348165 IDH3BO43837 385 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 TOP3BO95985 862 aaKnown RBP18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ALPIP09923 528 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 CDCA2Q69YH5 1023 aaPredicted RBP18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ZNF563Q8TA94 476 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 TEFMQ96QE5 360 aaKnown RBP18.38■□□□□ 0.53
UBE3C-201ENST00000348165 J3KR12 359 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ATP6V1G1O75348 118 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ZBTB11O95625 1053 aaPredicted RBP18.38■□□□□ 0.53
UBE3C-201ENST00000348165 KCNE1P15382 129 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 CMPK1P30085 196 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 NUP62P37198 522 aaPredicted RBP18.38■□□□□ 0.53
UBE3C-201ENST00000348165 SLC11A1P49279 550 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ECT2LQ008S8 904 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 PAOXQ6QHF9 649 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 FAM220AQ7Z4H9 259 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ZCCHC10Q8TBK6 192 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 TDRD1Q9BXT4 1180 aaKnown RBP18.38■□□□□ 0.53
UBE3C-201ENST00000348165 KLHL31Q9H511 634 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 SUV39H2Q9H5I1 410 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 TRIM32Q13049 653 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ZSWIM7Q19AV6 140 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 ZDHHC24Q6UX98 284 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 KRT77Q7Z794 578 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 COQ6Q9Y2Z9 468 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 HOXD13P35453 343 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 LIPEQ05469 1076 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 CBX3Q13185 183 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 MSANTD2Q6P1R3 559 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 BANPQ8N9N5 519 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 FAM47BQ8NA70 645 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 BCO2Q9BYV7 579 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 OSBPL2Q9H1P3 480 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 EHD3Q9NZN3 535 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 AK5Q9Y6K8 562 aa18.38■□□□□ 0.53
UBE3C-201ENST00000348165 A8MUI8 341 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 AGPSO00116 658 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 MLLT6P55198 1093 aaPredicted RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 OGDHQ02218 1023 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 GRSF1Q12849 480 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 UBXN2BQ14CS0 331 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 RFX4Q33E94 735 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 UBASH3BQ8TF42 649 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 CDH22Q9UJ99 828 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 LTN1O94822 1766 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 TP73O15350 636 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 MTX2O75431 263 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 COL6A1P12109 1028 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 PLA2G16P53816 162 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 RFTN1Q14699 578 aaPredicted RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 ZBTB6Q15916 424 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 SLC5A9Q2M3M2 681 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 ARSIQ5FYB1 569 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 DCAF12L1Q5VU92 463 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 MBLAC2Q68D91 279 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 PTCHD4Q6ZW05 846 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 GALNT5Q7Z7M9 940 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 KCTD13Q8WZ19 329 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 IL12RB2Q99665 862 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 CHID1Q9BWS9 393 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 SIX4Q9UIU6 781 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 URB1O60287 2271 aaKnown RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 ELOVL7A1L3X0 281 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 NIPSNAP2O75323 286 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 UGT2B17O75795 530 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 SIM2Q14190 667 aaPredicted RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 RFTN2Q52LD8 501 aaPredicted RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 PHC3Q8NDX5 983 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 TLCD1Q96CP7 247 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 HS3ST4Q9Y661 456 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 ERN1O75460 977 aaKnown RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 TNFRSF21O75509 655 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 TM7SF2O76062 418 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 S100A9P06702 114 aaKnown RBP18.37■□□□□ 0.53
UBE3C-201ENST00000348165 FECHP22830 423 aa18.37■□□□□ 0.53
UBE3C-201ENST00000348165 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms