RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PRICKLE1Q96MT3 831 aaPredicted RBP22.85■■□□□ 1.25
NPAS3-201ENST00000346562 TEX46H3BTG2 121 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 RGS10O43665 173 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 PGM3O95394 542 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 MMP8P22894 467 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 GRK6P43250 576 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 IL10RBQ08334 325 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 HSPB3Q12988 150 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 HCN1O60741 890 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 EDF1O60869 148 aaKnown RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 ZNF823P16415 610 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 HSPA7P48741 367 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 HSDL1Q3SXM5 330 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 HNRNPABQ99729 332 aaKnown RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 ATXN10Q9UBB4 475 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 SCGNO76038 276 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 CCNB2O95067 398 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 C4BPAP04003 597 aaKnown RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 TAF1AQ15573 450 aaPredicted RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 IL23RQ5VWK5 629 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 SETD6Q8TBK2 473 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 PMEPA1Q969W9 287 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 CCDC80Q76M96 950 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 HID1Q8IV36 788 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 SUN3Q8TAQ9 357 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 MRPS30Q9NP92 439 aaKnown RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 ZBTB11O95625 1053 aaPredicted RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 GOT2P00505 430 aaKnown RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 CYP4F8P98187 520 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 CHIT1Q13231 466 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 RNASE12Q5GAN4 147 aaKnown RBP22.84■■□□□ 1.25
NPAS3-201ENST00000346562 ZNF311Q5JNZ3 666 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 ARNTL2Q8WYA1 636 aa22.84■■□□□ 1.25
NPAS3-201ENST00000346562 L1CAMP32004 1257 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 HSD17B2P37059 387 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 LIX1Q8N485 282 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 ARL14EPQ8N8R7 260 aaPredicted RBP22.83■■□□□ 1.25
NPAS3-201ENST00000346562 IFT46Q9NQC8 304 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.83■■□□□ 1.25
NPAS3-201ENST00000346562 CLEC4AQ9UMR7 237 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 ADAMDEC1O15204 470 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 NADKO95544 446 aaPredicted RBP22.83■■□□□ 1.25
NPAS3-201ENST00000346562 REP15Q6BDI9 236 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 SLC35G5Q96KT7 338 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 PPM1MQ96MI6 270 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 GSDMCQ9BYG8 508 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 CST11Q9H112 138 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 IQCF5A8MTL0 148 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 ENTPD5O75356 428 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 PRPS2P11908 318 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 CPN2P22792 545 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 PLEKHG4Q58EX7 1191 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 SLCO6A1Q86UG4 719 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 CRYBG2Q8N1P7 616 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 CHCHD6Q9BRQ6 235 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 PCDHGB5Q9Y5G0 923 aa22.83■■□□□ 1.25
NPAS3-201ENST00000346562 SCELO95171 688 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 CLCN7P51798 805 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 UBXN2BQ14CS0 331 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 NDRG1Q92597 394 aaKnown RBP22.83■■□□□ 1.24
NPAS3-201ENST00000346562 CHRAC1Q9NRG0 131 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 AK5Q9Y6K8 562 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 PRR5-ARHGAP8B1AHC4 643 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 TM7SF2O76062 418 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 ARHGAP8P85298 464 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 KLF10Q13118 480 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 SLC30A8Q8IWU4 369 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 COX18Q8N8Q8 333 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 KLHL32Q96NJ5 620 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 GRIP1Q9Y3R0 1128 aa22.83■■□□□ 1.24
NPAS3-201ENST00000346562 SLC30A4O14863 429 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PDPK1O15530 556 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 AP2A2O94973 939 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 MON1BQ7L1V2 547 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 RALGPS2Q86X27 583 aaPredicted RBP22.82■■□□□ 1.24
NPAS3-201ENST00000346562 MCFD2Q8NI22 146 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 AGAP2Q99490 1192 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 RGS17Q9UGC6 210 aaPredicted RBP22.82■■□□□ 1.24
NPAS3-201ENST00000346562 MED31Q9Y3C7 131 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 GLTPD2A6NH11 291 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 METTL18O95568 372 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 ARL2P36404 184 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 VARS2Q5ST30 1063 aaKnown RBP22.82■■□□□ 1.24
NPAS3-201ENST00000346562 TSTD2Q5T7W7 516 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 THAP5Q7Z6K1 395 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 HDDC3Q8N4P3 179 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 LRRC4CQ9HCJ2 640 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PIAS1O75925 651 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PTX3P26022 381 aaPredicted RBP22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PRKD1Q15139 912 aaPredicted RBP22.82■■□□□ 1.24
NPAS3-201ENST00000346562 ECM1Q16610 540 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 TAC4Q86UU9 113 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PLD5Q8N7P1 536 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 KREMEN1Q96MU8 473 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PCDHB18PQ96TA0 734 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 UPB1Q9UBR1 384 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 ITGB1BP2Q9UKP3 347 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 PHF24Q9UPV7 400 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 TIMM22Q9Y584 194 aa22.82■■□□□ 1.24
NPAS3-201ENST00000346562 MAP2K7O14733 419 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms