RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 BEND7Q8N7W2 519 aaPredicted RBP15.82■□□□□ 0.12
RAB5C-201ENST00000346213 DDHD1Q8NEL9 900 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 DNAJC1Q96KC8 554 aaKnown RBP15.82■□□□□ 0.12
RAB5C-201ENST00000346213 DCBLD2Q96PD2 775 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 PHACTR1Q9C0D0 580 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 POLR1BQ9H9Y6 1135 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 ZFC3H1O60293 1989 aaKnown RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 DXOO77932 396 aaKnown RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 ALDH4A1P30038 563 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 FASLGP48023 281 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 LSSP48449 732 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 ARSDP51689 593 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 UBE2IP63279 158 aaKnown RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 TMEM115Q12893 351 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 SEPT7Q16181 437 aaKnown RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 PARP6Q2NL67 630 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 PDPK2PQ6A1A2 396 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 C4orf22Q6V702 233 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 LILRA3Q8N6C8 439 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 NAT8LQ8N9F0 302 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 RCBTB1Q8NDN9 531 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 SNIP1Q8TAD8 396 aaKnown RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 CPT1BQ92523 772 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 PWWP2AQ96N64 755 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 ROPN1BQ9BZX4 212 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 ROPN1Q9HAT0 212 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 ETNK1Q9HBU6 452 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 EVA1BQ9NVM1 165 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 NINJ2Q9NZG7 142 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.81■□□□□ 0.121e-7■■■□□ 16.5
RAB5C-201ENST00000346213 HACD3Q9P035 362 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 PAK5Q9P286 719 aa15.81■□□□□ 0.12
RAB5C-201ENST00000346213 ZNF624Q9P2J8 865 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-201ENST00000346213 OR51F1A6NGY5 319 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 CDRT15L2A8MXV6 281 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 PRAMEF1O95521 474 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 AP2A1O95782 977 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 ZNF7P17097 686 aaPredicted RBP15.8■□□□□ 0.12
RAB5C-201ENST00000346213 NFATC2Q13469 925 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 UBAP2Q5T6F2 1119 aaKnown RBP15.8■□□□□ 0.12
RAB5C-201ENST00000346213 FOXR1Q6PIV2 292 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 ARHGEF18Q6ZSZ5 1173 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 DET1Q7L5Y6 550 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 OR52K1Q8NGK4 314 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
RAB5C-201ENST00000346213 ZNF778Q96MU6 729 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 SLC46A1Q96NT5 459 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 TBC1D10AQ9BXI6 508 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 RMI1Q9H9A7 625 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 SMOXQ9NWM0 555 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 AAR2Q9Y312 384 aaKnown RBP15.8■□□□□ 0.12
RAB5C-201ENST00000346213 ATMQ13315 3056 aa15.8■□□□□ 0.12
RAB5C-201ENST00000346213 IGHV5-10-1A0A0J9YXX1 117 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 OR2AG2A6NM03 316 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 OR52A4PA6NMU1 304 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 AGAP14A8MT82 685 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CDK14O94921 469 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 F3P13726 295 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 LPOP22079 712 aaPredicted RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 RPL10P27635 214 aaKnown RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CCKBRP32239 447 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 ACTN2P35609 894 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 MAGEA4P43358 317 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 INHBCP55103 352 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SRSF6Q13247 344 aaKnown RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 POU6F1Q14863 301 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CLCA4Q14CN2 919 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 KYNUQ16719 465 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CCDC38Q502W7 563 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 LRRTM4Q86VH4 590 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 PIANPQ8IYJ0 282 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 GPR150Q8NGU9 434 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 DTX3LQ8TDB6 740 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 BRSK1Q8TDC3 778 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 LIN37Q96GY3 246 aaPredicted RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 NRTNQ99748 197 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 OSGEPL1Q9H4B0 414 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 IGSF10Q6WRI0 2623 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 RHPN2P1A8MT19 583 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 EIF3HO15372 352 aaKnown RBP eCLIP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 STX7O15400 261 aaKnown RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SRP72O76094 671 aaKnown RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CCL4P13236 92 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SLC19A1P41440 591 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CLCNKAP51800 687 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CBLBQ13191 982 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 ZNF658BQ4V348 819 aaPredicted RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CENPUQ71F23 418 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 OR6C4Q8NGE1 309 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 JPH3Q8WXH2 748 aaPredicted RBP15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SGF29Q96ES7 293 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 PGM2Q96G03 612 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 CCDC74BQ96LY2 380 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 TTC25Q96NG3 672 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 LRRC4CQ9HCJ2 640 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SAYSD1Q9NPB0 183 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 RAD18Q9NS91 495 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SLC2A6Q9UGQ3 507 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 SLC30A1Q9Y6M5 507 aa15.79■□□□□ 0.12
RAB5C-201ENST00000346213 ADAMTS20P59510 1910 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms