RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 GPRIN3Q6ZVF9 776 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 OR56A4Q8NGH8 313 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 VPS33AQ96AX1 596 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 ROPN1LQ96C74 230 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.41
RNF13-201ENST00000344229 BCAP29Q9UHQ4 241 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 PCDHB1Q9Y5F3 818 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.41
RNF13-201ENST00000344229 TIMP1P01033 207 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 LRG1P02750 347 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 CYBBP04839 570 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 RPS3P23396 243 aaKnown RBP eCLIP12.52□□□□□ -0.41
RNF13-201ENST00000344229 ACRV1P26436 265 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 HOXD12P35452 270 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 HTR6P50406 440 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 RHDQ02161 417 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 GSTM4Q03013 218 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 MPP7Q5T2T1 576 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 CCDC80Q76M96 950 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 ICA1LQ8NDH6 482 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 GPR26Q8NDV2 337 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 NUDT8Q8WV74 236 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 CENPKQ9BS16 269 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 NUSAP1Q9BXS6 441 aaKnown RBP12.52□□□□□ -0.41
RNF13-201ENST00000344229 CLPBQ9H078 707 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 AIG1Q9NVV5 245 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 NUDT4Q9NZJ9 180 aa12.52□□□□□ -0.41
RNF13-201ENST00000344229 TRAV19A0A0A6YYK7 116 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 GLYATL1P3A0A0U1RQE8 302 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 TCRBV3S1A0A5B6 114 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 BBIP1A8MTZ0 92 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 CCL16O15467 120 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 BNIP3LO60238 219 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 TRIM16O95361 564 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 IDO1P14902 403 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 ZNF7P17097 686 aaPredicted RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 RPL26P61254 145 aaKnown RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 MED21Q13503 144 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 FUT11Q495W5 492 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 CRTC1Q6UUV9 634 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 GOLGA7Q7Z5G4 137 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 OR2AP1Q8NGE2 309 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 ZNF382Q96SR6 550 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 HBEGFQ99075 208 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 ABCG8Q9H221 673 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 SEMA6AQ9H2E6 1030 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 CMTM6Q9NX76 183 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 NDUFAF1Q9Y375 327 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 MYO7AQ13402 2215 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 FFAR2O15552 330 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 SOCS5O75159 536 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 VPS4BO75351 444 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 CXCL14O95715 111 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 GUCA1CO95843 209 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 IGSF6O95976 241 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 IL12AP29459 219 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 CD97P48960 835 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 GALK1P51570 392 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 TMED1Q13445 227 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 PCBP2Q15366 365 aaKnown RBP eCLIP12.51□□□□□ -0.412e-8■■■■■ 48.6
RNF13-201ENST00000344229 PHKG1Q16816 387 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 GPRC6AQ5T6X5 926 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 ADGRG2Q8IZP9 1017 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 PCYOX1LQ8NBM8 494 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 MYLIPQ8WY64 445 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 LRTOMTQ8WZ04 291 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 NMD3Q96D46 503 aaKnown RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 ARPC5LQ9BPX5 153 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 ATP13A3Q9H7F0 1226 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 SLAMF8Q9P0V8 285 aa12.51□□□□□ -0.41
RNF13-201ENST00000344229 PRRC2BQ5JSZ5 2229 aaKnown RBP12.51□□□□□ -0.41
RNF13-201ENST00000344229 ANGPT2O15123 496 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 CAPN1P07384 714 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 ATP6V1B2P21281 511 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 SLC6A2P23975 617 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 GRIA2P42262 883 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 RPS6KA2Q15349 733 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 AAK1Q2M2I8 961 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 LRRC73Q5JTD7 316 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 PAGE3Q5JUK9 113 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 C6orf136Q5SQH8 315 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 UGT2A3Q6UWM9 527 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 SPATA19Q7Z5L4 167 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 TMEM25Q86YD3 366 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 TMEM126BQ8IUX1 230 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 RBFAQ8N0V3 343 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 OR4F6Q8NGB9 312 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 LRRC58Q96CX6 371 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 MRPL40Q9NQ50 206 aaKnown RBP12.5□□□□□ -0.41
RNF13-201ENST00000344229 UBAP1Q9NZ09 502 aa12.5□□□□□ -0.41
RNF13-201ENST00000344229 EPS15L1Q9UBC2 864 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms