RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 LEF1Q9UJU2 399 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 RIPK3Q9Y572 518 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 POLR2AP24928 1970 aaKnown RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 A0A1W2PP18 115 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 C2CD4BA6NLJ0 364 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 DDX39AO00148 427 aaKnown RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 UPK1AO00322 258 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 EEF2KO00418 725 aaKnown RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 KCNJ13O60928 360 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ATG7O95352 703 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 S1PR4O95977 384 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ITGB3P05106 788 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ALPPP05187 535 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ANXA6P08133 673 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 SUPT20HL2P0C7V6 817 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 MTHFD1P11586 935 aaKnown RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 GLULP15104 373 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 PDGFRAP16234 1089 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF30P17039 623 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CSTF2P33240 577 aaKnown RBP eCLIP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 TGFBR2P37173 567 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 MAGEA11P43364 429 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 NPY2RP49146 381 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 GZMKP49863 264 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 TKTL1P51854 596 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 BLVRAP53004 296 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 SNAP25P60880 206 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CRADDP78560 199 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 SMARCB1Q12824 385 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 DGCR6Q14129 220 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 RPS6KA2Q15349 733 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 TRIP4Q15650 581 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 FAM83EQ2M2I3 478 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 MFSD14BQ5SR56 506 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 JADE1Q6IE81 842 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CES5AQ6NT32 575 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CNSTQ6PJW8 725 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CCDC190Q86UF4 302 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 AMIGO1Q86WK6 493 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 HIPK1Q86Z02 1210 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ADHFE1Q8IWW8 467 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 OR5K1Q8NHB7 308 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 NSUN6Q8TEA1 469 aaKnown RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 KCTD4Q8WVF5 259 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 DEDD2Q8WXF8 326 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CIDECQ96AQ7 238 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CDCA5Q96FF9 252 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 SEPHS2Q99611 448 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 SLC30A2Q9BRI3 323 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 ROGDIQ9GZN7 287 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 TMEM168Q9H0V1 697 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 IL1RL2Q9HB29 575 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 NTN4Q9HB63 628 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 C3orf14Q9HBI5 128 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 MAP10Q9P2G4 905 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 CDH9Q9ULB4 789 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 USP22Q9UPT9 525 aa8.03□□□□□ -1.12
ATG4A-201ENST00000343524 SSC5DA1L4H1 1573 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GNGT2O14610 69 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 EEDO75530 441 aaKnown RBP8.02□□□□□ -1.13
ATG4A-201ENST00000343524 OR2B3O76000 313 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 IPO13O94829 963 aaKnown RBP8.02□□□□□ -1.13
ATG4A-201ENST00000343524 FADS2O95864 444 aaKnown RBP8.02□□□□□ -1.13
ATG4A-201ENST00000343524 F9P00740 461 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 RBP1P09455 135 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SLC35E2BP0CK96 405 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 ATF6P18850 670 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 HDCP19113 662 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 AGXTP21549 392 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 BDNFP23560 247 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 FMO4P31512 558 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GLUD2P49448 558 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 RGS7P49802 495 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 NKX3-2P78367 333 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SCN1BQ07699 218 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SCRN3Q0VDG4 424 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GRM3Q14832 879 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 DPYSL2Q16555 572 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 AAK1Q2M2I8 961 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 LEXMQ3ZCV2 418 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 BCL7AQ4VC05 210 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 CLVS2Q5SYC1 327 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GARNL3Q5VVW2 1013 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SHEQ5VZ18 495 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 BSPRYQ5W0U4 402 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SULT1C3Q6IMI6 304 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 TLK2Q86UE8 772 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 KRT73Q86Y46 540 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 FUNDC1Q8IVP5 155 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 BRSK2Q8IWQ3 736 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 VWA5B2Q8N398 1253 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 OR9I1Q8NGQ6 314 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 RXFP2Q8WXD0 754 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SGCDQ92629 289 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GIMAP5Q96F15 307 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 HEXIM2Q96MH2 286 aaKnown RBP8.02□□□□□ -1.13
ATG4A-201ENST00000343524 LPIN3Q9BQK8 851 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms