RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SBF1O95248 1867 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RFPL2O75678 378 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 GIMD1P0DJR0 217 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 PGAM2P15259 253 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DNAJB2P25686 324 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SLC22A10Q63ZE4 541 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RIOX2Q8IUF8 465 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 TCEANCQ8N8B7 351 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 COQ10AQ96MF6 247 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 COG8Q96MW5 612 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 NECAB3Q96P71 396 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 ALPK1Q96QP1 1244 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 NFKBIZQ9BYH8 718 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZYG11BQ9C0D3 744 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 PHRF1Q9P1Y6 1649 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 RBBP6Q7Z6E9 1792 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 TXNL1O43396 289 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 S100A8P05109 93 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PTPN11Q06124 597 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 RTL4Q6ZR62 310 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SYT12Q8IV01 421 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 Q8N402 240 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 OR4A15Q8NGL6 344 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SNX33Q8WV41 574 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PANX1Q96RD7 426 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 WACQ9BTA9 647 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 RNF32Q9H0A6 362 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 MYNNQ9NPC7 610 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 RPS10P5Q9NQ39 176 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PRMT7Q9NVM4 692 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 KCNS2Q9ULS6 477 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 DENND4CQ5VZ89 1909 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TRAV6A0A075B6T7 132 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TRAFD1O14545 582 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 OGTO15294 1046 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 C6orf222P0C671 652 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZSCAN5DPP0CG00 497 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 UBXN2AP68543 259 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CHAF1BQ13112 559 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 STK11Q15831 433 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PUS10Q3MIT2 529 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 KANSL1Q7Z3B3 1105 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PIAS4Q8N2W9 510 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 ACTL9Q8TC94 416 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CORO2AQ92828 525 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 INPP4AQ96PE3 977 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 PNMA5Q96PV4 448 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 FUNDC2Q9BWH2 189 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 UCK2Q9BZX2 261 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 B3GNT4Q9C0J1 378 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CDHR5Q9HBB8 845 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 COMMD3Q9UBI1 195 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SEC14L3Q9UDX4 400 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 STUB1Q9UNE7 303 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PCDHGB2Q9Y5G2 931 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 XDHP47989 1333 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 COL11A1P12107 1806 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 OAZ2O95190 189 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 GABRB2P47870 512 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CDH15P55291 814 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TRAM1Q15629 374 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 GOLGA7BQ2TAP0 167 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TIGD2Q4W5G0 525 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CERCAMQ5T4B2 595 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 OR2T12Q8NG77 320 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 STAG3L4Q8TBR4 150 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SNX27Q96L92 541 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 LRRC42Q9Y546 428 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PCNX3Q9H6A9 2034 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 LRRN3E7EW58 273 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 HCRTR2O43614 444 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 AVILO75366 819 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PDE8BO95263 885 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CYP2E1P05181 493 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZBTB48P10074 688 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 GLRA2P23416 452 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 STXBP1P61764 594 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-25P63136 954 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 UBE2SQ16763 222 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SCGB2B2Q4G0G5 96 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ANXA8L1Q5VT79 327 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 DNAJC10Q8IXB1 793 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PCDH20Q8N6Y1 951 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 RPLP0P6Q8NHW5 317 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 DEDD2Q8WXF8 326 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 HPDLQ96IR7 371 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZNF347Q96SE7 839 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-6Q9BXR3 956 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 LRRN3Q9H3W5 708 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 WDCPQ9H6R7 721 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CPNE5Q9HCH3 593 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZNF358Q9NW07 568 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZNF226Q9NYT6 803 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-18Q9QC07 812 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 N6AMT1Q9Y5N5 214 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PTPRTO14522 1441 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 FAM208BQ5VWN6 2430 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SHBGP04278 402 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CDK1P06493 297 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms