RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 KIAA1324Q6UXG2 1013 aaKnown RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF517Q6ZMY9 492 aaPredicted RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 MOB2Q70IA6 237 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SLC44A5Q8NCS7 719 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 OR5T2Q8NGG2 359 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 TOR3AQ9H497 397 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 DLG2Q15700 870 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 S100A7AQ86SG5 101 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 A0A0A0MRY4 1105 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 PIP5K1CO60331 668 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 PNLIPRP1P54315 467 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 C22orf15Q8WYQ4 148 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 OR8D1Q8WZ84 308 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SPATA13Q96N96 652 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 TCF25Q9BQ70 676 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 BRF2Q9HAW0 419 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 ZDHHC4Q9NPG8 344 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 ASAH2Q9NR71 780 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CNOT6Q9ULM6 557 aaKnown RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 ASF1AQ9Y294 204 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 OR6C70A6NIJ9 312 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 MRPL49Q13405 166 aaKnown RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SMIM15Q7Z3B0 74 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SAMD14Q8IZD0 417 aaPredicted RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CADM2Q8N3J6 435 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SSX3Q99909 188 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 ATG10Q9H0Y0 220 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 MSRAQ9UJ68 235 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 LPOP22079 712 aaPredicted RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SLC13A2Q13183 592 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 UBAP2Q5T6F2 1119 aaKnown RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CLPTM1LQ96KA5 538 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 C1orf196B1AJZ1 125 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 GMFGO60234 142 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 RPL10P27635 214 aaKnown RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 PQLC1Q8N2U9 271 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 LRRC58Q96CX6 371 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CPVLQ9H3G5 476 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 LINC00032P0C843 101 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 SLC7A1P30825 629 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 UGT1A3P35503 534 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 VASH1Q7L8A9 365 aaPredicted RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CCDC28AQ8IWP9 274 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 MB21D2Q8IYB1 491 aaPredicted RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 TOMM5Q8N4H5 51 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 EDEM1Q92611 657 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CELF6Q96J87 481 aaKnown RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 COL15A1P39059 1388 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 MIA3Q5JRA6 1907 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 SLC25A14O95258 325 aaPredicted RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 PAEPP09466 180 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CCNB1P14635 433 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF132P52740 706 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 SLC26A5P58743 744 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 EEF1A2Q05639 463 aaKnown RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ACVR2BQ13705 512 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 C3P1Q6ZMU1 363 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CEP68Q76N32 757 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 TKTL2Q9H0I9 626 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 PXMP2Q9NR77 195 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 THUMPD1Q9NXG2 353 aaKnown RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 RPL36Q9Y3U8 105 aaKnown RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ELOVL7A1L3X0 281 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CYP2B6P20813 491 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 NT5EP21589 574 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CCR10P46092 362 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ALDH3B2P48448 385 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 POLR2JP52435 117 aaKnown RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.387e-8■■■□□ 16.8
SMAD4-201ENST00000342988 RAB31Q13636 194 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ZCCHC23Q6ZST2 131 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 HIPK3Q9H422 1215 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 FN3KQ9H479 309 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 POLR1CO15160 346 aaPredicted RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 TPH1P17752 444 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 GNAZP19086 355 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 KHKP50053 298 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 RAB4BP61018 213 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 NFKB2Q00653 900 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 VWA5B1Q5TIE3 1220 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 TSPAN3O60637 253 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 GABBR2O75899 941 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 IFNA17P01571 189 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ALAS2P22557 587 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 FUKQ8N0W3 1084 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 SLC43A3Q8NBI5 491 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ASLP04424 464 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 IL7RP16871 459 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 UQCRC1P31930 480 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 KIR3DL1P43629 444 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF358Q9NW07 568 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 HDAC3O15379 428 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 TSHRP16473 764 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 TBX2Q13207 712 aaPredicted RBP17.43■□□□□ 0.38
SMAD4-201ENST00000342988 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 C11orf16Q9NQ32 467 aa17.43■□□□□ 0.38
SMAD4-201ENST00000342988 CRTAC1Q9NQ79 661 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms