RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 FAM234BA2RU67 622 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 ZBBXA8MT70 800 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 HS6ST1O60243 411 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 HOXC8P31273 242 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 FKBP1BP68106 108 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 EIF4EBP2Q13542 120 aaPredicted RBP22.09■■□□□ 1.13
TRIM28-202ENST00000341753 XKR7Q5GH72 579 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 SLC7A5P1Q8MH63 180 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 OR52B6Q8NGF0 335 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 OR10Q1Q8NGQ4 319 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 RHEBL1Q8TAI7 183 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 AARSD1Q9BTE6 412 aaKnown RBP22.09■■□□□ 1.13
TRIM28-202ENST00000341753 TBCDQ9BTW9 1192 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 BRINP2Q9C0B6 783 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 NMUR1Q9HB89 426 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 GIT1Q9Y2X7 761 aa22.09■■□□□ 1.13
TRIM28-202ENST00000341753 OXSR1O95747 527 aaPredicted RBP22.08■■□□□ 1.13
TRIM28-202ENST00000341753 CHEK2O96017 543 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 G6PDP11413 515 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 HTR6P50406 440 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 ERVK-8P63133 956 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 INAVAQ3KP66 663 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 SETMARQ53H47 684 aaPredicted RBP22.08■■□□□ 1.13
TRIM28-202ENST00000341753 TTC23Q5W5X9 447 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 MRNIPQ6NTE8 343 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 GALNT7Q86SF2 657 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 CIR1Q86X95 450 aaPredicted RBP22.08■■□□□ 1.13
TRIM28-202ENST00000341753 TSPEARQ8WU66 669 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 KIAA1191Q96A73 305 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 NODALQ96S42 347 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 CATSPERZQ9NTU4 200 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 KIAA1522Q9P206 1035 aaPredicted RBP22.08■■□□□ 1.13
TRIM28-202ENST00000341753 TYW5A2RUC4 315 aaKnown RBP22.08■■□□□ 1.13
TRIM28-202ENST00000341753 DFNA5O60443 496 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 NDUFS2O75306 463 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 THPOP40225 353 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 MAP2K4P45985 399 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 VBP1P61758 197 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 PRKG2Q13237 762 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 UPP1Q16831 310 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 BRMS1LQ5PSV4 323 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 TMEM179BQ7Z7N9 219 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 ZFAND4Q86XD8 727 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 FAM126BQ8IXS8 530 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 OR10T2Q8NGX3 314 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 GLMNQ92990 594 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 FUBP1Q96AE4 644 aaKnown RBP22.08■■□□□ 1.13
TRIM28-202ENST00000341753 OSER1Q9NX31 292 aa22.08■■□□□ 1.13
TRIM28-202ENST00000341753 SLC1A7O00341 560 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 UGT2B11O75310 529 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 PRSS23O95084 383 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 NADKO95544 446 aaPredicted RBP22.08■■□□□ 1.12
TRIM28-202ENST00000341753 RPS17P08708 135 aaKnown RBP22.08■■□□□ 1.12
TRIM28-202ENST00000341753 INAQ16352 499 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 C17orf99Q6UX52 265 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 TMEM86AQ8N2M4 240 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 SMIM14Q96QK8 99 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 CGREF1Q99674 301 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 GPR21Q99679 349 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 COMMD8Q9NX08 183 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 MED16Q9Y2X0 877 aa22.08■■□□□ 1.12
TRIM28-202ENST00000341753 GSTA4O15217 222 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 TULP3O75386 442 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 SOAT2O75908 522 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 OR4Q2P0C623 313 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 UROSP10746 265 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 ADPRMQ3LIE5 342 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 Q6ZSR9 355 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 OR7A2PQ8NGA2 310 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 OR4L1Q8NH43 312 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 ARRDC2Q8TBH0 407 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 AURKBQ96GD4 344 aaPredicted RBP22.07■■□□□ 1.12
TRIM28-202ENST00000341753 CYP2S1Q96SQ9 504 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 SEMA3CQ99985 751 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 PCTPQ9UKL6 214 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 BMP4P12644 408 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 AKR1A1P14550 325 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 GGT1P19440 569 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 CDKN1CP49918 316 aaPredicted RBP22.07■■□□□ 1.12
TRIM28-202ENST00000341753 DGCR6Q14129 220 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 C18orf21Q32NC0 220 aaPredicted RBP22.07■■□□□ 1.12
TRIM28-202ENST00000341753 SDHAF4Q5VUM1 108 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 SCD5Q86SK9 330 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 RASAL3Q86YV0 1011 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 OR10A6Q8NH74 314 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 OSBPL10Q9BXB5 764 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 VAPAQ9P0L0 249 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 FBXO10Q9UK96 956 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 PADI3Q9ULW8 664 aa22.07■■□□□ 1.12
TRIM28-202ENST00000341753 PCSK1P29120 753 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 TGFBR1P36897 503 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 CCDC81Q6ZN84 652 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 ZNF583Q96ND8 569 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 ACTL8Q9H568 366 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 KLQ9UEF7 1012 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 ADGRE2Q9UHX3 823 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 FAM92AA1XBS5 289 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 M0R3G1 203 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 UGT2B4P06133 528 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 PCMT1P22061 227 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms