RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SPANXN3Q5MJ09 141 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CERS2Q96G23 380 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 NDNQ99608 321 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CDC6Q99741 560 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 TIMM29Q9BSF4 260 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 ZDHHC18Q9NUE0 388 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 IMP3Q9NV31 184 aaKnown RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CIDEBQ9UHD4 219 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 FAM169AQ9Y6X4 670 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 RHPN2P1A8MT19 583 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 SMAPO00193 183 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 TPP1O14773 563 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 HAUS5O94927 633 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 CKMT1AP12532 417 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 BRAFP15056 766 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 IDSP22304 550 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 ACADVLP49748 655 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 ITIH4Q14624 930 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 EFTUD2Q15029 972 aaKnown RBP eCLIP12.96□□□□□ -0.34
TUBD1-202ENST00000340993 BCL7AQ4VC05 210 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 C14orf28Q4W4Y0 310 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 CTSL3PQ5NE16 218 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 LYPLAL1Q5VWZ2 237 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 NKAIN2Q5VXU1 208 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 CNSTQ6PJW8 725 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 CERS6Q6ZMG9 384 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 SDR16C5Q8N3Y7 309 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 ARL14Q8N4G2 192 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 MAPK15Q8TD08 544 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 GLMNQ92990 594 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 NRTNQ99748 197 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 CCM2Q9BSQ5 444 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 VPS37BQ9H9H4 285 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 LRIT1Q9P2V4 623 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 RUVBL2Q9Y230 463 aaKnown RBP12.96□□□□□ -0.34
TUBD1-202ENST00000340993 FRYQ5TBA9 3013 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 KNTC1P50748 2209 aa12.96□□□□□ -0.34
TUBD1-202ENST00000340993 PTPRBP23467 1997 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 MGAT4DA6NG13 374 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 GPR89AB7ZAQ6 455 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 E7ESA3 106 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 PRMT5O14744 637 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-202ENST00000340993 TTC4O95801 387 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 GPR89BP0CG08 455 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 F3P13726 295 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 SAT1P21673 171 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-202ENST00000340993 MAGEA4P43358 317 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 OR1D5P58170 312 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 HSPA14Q0VDF9 509 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 N4BP2L1Q5TBK1 243 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-202ENST00000340993 PACS1Q6VY07 963 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 CHCHD4Q8N4Q1 142 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 GPR156Q8NFN8 814 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 GPR150Q8NGU9 434 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 OR2L2Q8NH16 312 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 CFAP61Q8NHU2 1237 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 SKA2Q8WVK7 121 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-202ENST00000340993 LPGAT1Q92604 370 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-202ENST00000340993 C12orf66Q96MD2 445 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 CCDC3Q9BQI4 270 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 COG4Q9H9E3 785 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 GALPQ9UBC7 116 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 GNPTGQ9UJJ9 305 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 FBXO5Q9UKT4 447 aa12.95□□□□□ -0.34
TUBD1-202ENST00000340993 ATXN7L1Q9ULK2 861 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-202ENST00000340993 NDC80O14777 642 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 PPM1DO15297 605 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 RFPL3O75679 317 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 S1PR4O95977 384 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CHRM3P20309 590 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 MPSTP25325 297 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 RPIAP49247 311 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 GPX6P59796 221 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 HHEXQ03014 270 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CAV1Q03135 178 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CUL1Q13616 776 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 GLE1Q53GS7 698 aaKnown RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 LVRNQ6Q4G3 990 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 XKR5Q6UX68 686 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 VRK3Q8IV63 474 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 GSDMBQ8TAX9 411 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 HEXDCQ8WVB3 486 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CXorf40BQ96DE9 158 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 FMO2Q99518 471 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 C19orf43Q9BQ61 176 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 FAM167BQ9BTA0 163 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 ABCG4Q9H172 646 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 MTRF1LQ9UGC7 380 aaKnown RBP12.94□□□□□ -0.34
TUBD1-202ENST00000340993 PSAT1Q9Y617 370 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CELSR3Q9NYQ7 3312 aa12.94□□□□□ -0.34
TUBD1-202ENST00000340993 CXorf49A8MYA2 514 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms