RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CDH17Q12864 832 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 NEDD8Q15843 81 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 SMU1Q2TAY7 513 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 CEP78Q5JTW2 689 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 NAPEPLDQ6IQ20 393 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 RANBP10Q6VN20 620 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 TICAM1Q8IUC6 712 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 ZNF366Q8N895 744 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 IRF7Q92985 503 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 EGLN2Q96KS0 407 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 MTG2Q9H4K7 406 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 FAM96AQ9H5X1 160 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 COQ10BQ9H8M1 238 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 SFXN1Q9H9B4 322 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 SNX15Q9NRS6 342 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 AP3B1O00203 1094 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 CLOCKO15516 846 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 RNASEH2AO75792 299 aaKnown RBP14.91□□□□□ -0.02
BRAT1-201ENST00000340611 FSHRP23945 695 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 PMS2P3Q13401 168 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 EML3Q32P44 896 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 ZBED5Q49AG3 693 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 SIRPB2Q5JXA9 342 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 NXNQ6DKJ4 435 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 ESRP1Q6NXG1 681 aaKnown RBP14.91□□□□□ -0.02
BRAT1-201ENST00000340611 CHST15Q7LFX5 561 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-201ENST00000340611 C12orf40Q86WS4 652 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 SPHK2Q9NRA0 654 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 VPS45Q9NRW7 570 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 PADI4Q9UM07 663 aa14.91□□□□□ -0.02
BRAT1-201ENST00000340611 FNDC3AQ9Y2H6 1198 aaKnown RBP14.91□□□□□ -0.02
BRAT1-201ENST00000340611 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-201ENST00000340611 CDK2AP1O14519 115 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 TUBA1BP68363 451 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 FUT11Q495W5 492 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 TUBA1AQ71U36 451 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 CHERPQ8IWX8 916 aaKnown RBP14.9□□□□□ -0.02
BRAT1-201ENST00000340611 ADCY4Q8NFM4 1077 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 CYB5D2Q8WUJ1 264 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 ALPK1Q96QP1 1244 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 SLC2A11Q9BYW1 496 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 SLCO3A1Q9UIG8 710 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 F5P12259 2224 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 ZNF197O14709 1029 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 CYBBP04839 570 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 ABCB1P08183 1280 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-201ENST00000340611 MLNP12872 115 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 PLEKHG6Q3KR16 790 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 LSM12Q3MHD2 195 aaKnown RBP14.9□□□□□ -0.02
BRAT1-201ENST00000340611 PIGGQ5H8A4 983 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 TANGO2Q6ICL3 276 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 C16orf89Q6UX73 402 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 CPXM2Q8N436 756 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 DCLK2Q8N568 766 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-201ENST00000340611 BLOC1S5Q8TDH9 187 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 SGF29Q96ES7 293 aa14.9□□□□□ -0.02
BRAT1-201ENST00000340611 RPP25Q9BUL9 199 aaKnown RBP14.9□□□□□ -0.02
BRAT1-201ENST00000340611 A8MX80 341 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 AURKAO14965 403 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 KMOO15229 486 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 LATS1O95835 1130 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 POLR2EP19388 210 aaKnown RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 IGFBP4P22692 258 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 MLLT10P55197 1068 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 FOXD4Q12950 439 aaPredicted RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 GRIN2CQ14957 1233 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 ESX1Q8N693 406 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 ATP6V1E2Q96A05 226 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 PSKH2Q96QS6 385 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 OLFM1Q99784 485 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 UNKQ9C0B0 810 aaKnown RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 TRIT1Q9H3H1 467 aaKnown RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 WDR41Q9HAD4 459 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 DUS2Q9NX74 493 aaKnown RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 SEPT3Q9UH03 358 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 PRPF19Q9UMS4 504 aaKnown RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 DGKBQ9Y6T7 804 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 A0A0C4DFX4 3053 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 KIF26AQ9ULI4 1882 aaPredicted RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 ZCWPW2A0A1B0GU75 182 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 RGSL1A5PLK6 1076 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 PGAM1P18669 254 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 CXCR2P25025 360 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 GRIA3P42263 894 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 RHOAP61586 193 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 OXA1LQ15070 435 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 RYBPQ8N488 228 aaPredicted RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 NPAS2Q99743 824 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 EPS8L2Q9H6S3 715 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 CLEC1BQ9P126 229 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
BRAT1-201ENST00000340611 SATB2Q9UPW6 733 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 OR51F1A6NGY5 319 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 ALDH1A2O94788 518 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 PIGNO95427 931 aa14.89□□□□□ -0.03
BRAT1-201ENST00000340611 PHC1P78364 1004 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms