RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 GULP1Q9UBP9 304 aa17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 SLC23A2Q9UGH3 650 aa17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 KLF15Q9UIH9 416 aa17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 TRMT6Q9UJA5 497 aaKnown RBP17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 SNX11Q9Y5W9 270 aa17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 TP53BP1Q12888 1972 aaPredicted RBP17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 CACNA1EQ15878 2313 aa17.57■□□□□ 0.4
SDCBP2-201ENST00000339987 PRR19A6NJB7 356 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 H3BM21 787 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 AGPSO00116 658 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 LIN7AO14910 233 aaPredicted RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 ATP8B1O43520 1251 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 SASH3O75995 380 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 WISP3O95389 354 aaPredicted RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 ALDOAP04075 364 aaKnown RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 RETP07949 1114 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 JUNDP17535 347 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 SAT1P21673 171 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 CRABP2P29373 138 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 PDAP1Q13442 181 aaKnown RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 GBX1Q14549 363 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 TTLL9Q3SXZ7 439 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 PLA2G2CQ5R387 149 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 PLEKHS1Q5SXH7 462 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 CHST15Q7LFX5 561 aaPredicted RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 OTOAQ7RTW8 1153 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 PIM3Q86V86 326 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 SIDT2Q8NBJ9 832 aaKnown RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 GIMAP7Q8NHV1 300 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 PGM2Q96G03 612 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 ARRDC1-AS1Q9H2J1 176 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 ACBD3Q9H3P7 528 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 COG4Q9H9E3 785 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 SARS2Q9NP81 518 aaKnown RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 SNX15Q9NRS6 342 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 TM7SF3Q9NS93 570 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 GALPQ9UBC7 116 aa17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 APOBEC3BQ9UH17 382 aaKnown RBP17.56■□□□□ 0.4
SDCBP2-201ENST00000339987 SLC5A10A0PJK1 596 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 EIF3FO00303 357 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TPP1O14773 563 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 RGS16O15492 202 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GPC4O75487 556 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 APOA4P06727 396 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 MYZAPP0CAP1 466 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ACP5P13686 325 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TYK2P29597 1187 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PBLDP30039 288 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PI4KAP42356 2102 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 RXRGP48443 463 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 HNRNPKP61978 463 aaKnown RBP eCLIP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PLOD1Q02809 727 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GRIK2Q13002 908 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 RPA4Q13156 261 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ZNF423Q2M1K9 1284 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PLA2G4EQ3MJ16 856 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ZNF542PQ5EBM4 170 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TRIM61Q5EBN2 209 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 IL27RAQ6UWB1 636 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 XKR5Q6UX68 686 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 CMC1Q7Z7K0 106 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 FSTL5Q8N475 847 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GPBAR1Q8TDU6 330 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ACMSDQ8TDX5 336 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ASZ1Q8WWH4 475 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GLMNQ92990 594 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 FAM136AQ96C01 138 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 SLC30A3Q99726 388 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TMEM168Q9H0V1 697 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TCEAL2Q9H3H9 227 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PCDH15Q96QU1 1955 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GOLGA6L10A6NI86 522 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PATE3B3GLJ2 98 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PHGDHO43175 533 aaKnown RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 DFNA5O60443 496 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 RFPL1O75677 317 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 MT-ND3P03897 115 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 MPOP05164 745 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 SYPP08247 313 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 CBSLP0DN79 551 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ZNF37AP17032 561 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 KRT15P19012 456 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ATP5DP30049 168 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 CBSP35520 551 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 CTBSQ01459 385 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ILF3Q12906 894 aaKnown RBP eCLIP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 BOP1Q14137 746 aaKnown RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 NFE2L1Q14494 772 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TNFAIP8L3Q5GJ75 292 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 METRNLQ641Q3 311 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 PAQR3Q6TCH7 311 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 ELF4Q99607 663 aaPredicted RBP17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 LRRC61Q9BV99 259 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GSDMCQ9BYG8 508 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 TMBIM4Q9HC24 238 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 SYTL2Q9HCH5 934 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 GPAMQ9HCL2 828 aa17.55■□□□□ 0.4
SDCBP2-201ENST00000339987 KLC4Q9NSK0 619 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms