RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TRAM1L1Q8N609 369 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 CPSF7Q8N684 471 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 OR52B6Q8NGF0 335 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 SKA2Q8WVK7 121 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 AP2M1Q96CW1 435 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 C1QTNF3Q9BXJ4 246 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 KCTD5Q9NXV2 234 aa22.07■■□□□ 1.12
PDLIM2-203ENST00000339162 RAD51BO15315 384 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 MAGEC1O60732 1142 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 CRCPO75575 148 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 ITGB7P26010 798 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 TMIEQ8NEW7 156 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 ACTRT2Q8TDY3 377 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 EGFL8Q99944 293 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 SMOXQ9NWM0 555 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 LINC00032P0C843 101 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 ARL1P40616 181 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 GDF5P43026 501 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 HSPA7P48741 367 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 STON2Q8WXE9 905 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 FAM161BQ96MY7 647 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 ZSCAN5AQ9BUG6 496 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 CLDND1Q9NY35 253 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 OARD1Q9Y530 152 aa22.06■■□□□ 1.12
PDLIM2-203ENST00000339162 MUC22E2RYF6 1773 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 TAPBPO15533 448 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 S100BP04271 92 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 MSH3P20585 1137 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 AOAHP28039 575 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 MNAT1P51948 309 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 SCIMPQ6UWF3 145 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 LARP4Q71RC2 724 aaKnown RBP eCLIP22.05■■□□□ 1.126e-7■■□□□ 13.2
PDLIM2-203ENST00000339162 UCMAQ8WVF2 138 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 C1orf21Q9H246 121 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 NOL11Q9H8H0 719 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 AKTIPQ9H8T0 292 aa22.05■■□□□ 1.12
PDLIM2-203ENST00000339162 VGLL3A8MV65 326 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 AIM2O14862 343 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 WNT9AO14904 365 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 UBDO15205 165 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 SGTAO43765 313 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 GPC4O75487 556 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 ADRB3P13945 408 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 PSMD8P48556 350 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 OR56A4Q8NGH8 313 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 WDR60Q8WVS4 1066 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 ELSPBP1Q96BH3 223 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 PRSS16Q9NQE7 514 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 THAP10Q9P2Z0 257 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 RGSL1A5PLK6 1076 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 K7ESM1 405 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 MMP20O60882 483 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 OR4F21O95013 312 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 DNAL1Q4LDG9 190 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 TCHHL1Q5QJ38 904 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 CHSY3Q70JA7 882 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 BTN2A2Q8WVV5 523 aa22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 TRMT61BQ9BVS5 477 aaKnown RBP22.04■■□□□ 1.12
PDLIM2-203ENST00000339162 KIAA1549LQ6ZVL6 1849 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 KRT87PA6NCN2 255 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 TMEM202A6NGA9 273 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 ESRRBO95718 433 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 MLYCDO95822 493 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 VCLP18206 1134 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 ERFP50548 548 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 GOLGA7Q7Z5G4 137 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 EFCAB3Q8N7B9 438 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 CDYL2Q8N8U2 506 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 PDPRQ8NCN5 879 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 DDHD1Q8NEL9 900 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 CD248Q9HCU0 757 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 PTBP2Q9UKA9 531 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 TMCO1Q9UM00 188 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 PLXNA2O75051 1894 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 PRUNE2Q8WUY3 3088 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 CFAP99D6REC4 459 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 THRAP10827 490 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 ITGAXP20702 1163 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 PRDX6P30041 224 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 CTSCP53634 463 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 ERVPABLB-1P60509 514 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 CYLC2Q14093 348 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 KPNB1Q14974 876 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 GPRIN3Q6ZVF9 776 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 TRIM74Q86UV6 250 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 SCUBE1Q8IWY4 988 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 ULK2Q8IYT8 1036 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 TDHQ8IZJ6 230 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 HMGCLL1Q8TB92 370 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 ELMO1Q92556 727 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 GLYATL1Q969I3 302 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 COQ10AQ96MF6 247 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 DYRK4Q9NR20 520 aa22.03■■□□□ 1.12
PDLIM2-203ENST00000339162 AREL1O15033 823 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 CCNT2O60583 730 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 KATNA1O75449 491 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 TM7SF2O76062 418 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 RECQL5O94762 991 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 ALDOCP09972 364 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 GRIA2P42262 883 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms