RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ZNF510Q9Y2H8 683 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ANXA4P09525 319 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 MSL3P1P0C860 447 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ZFP69Q49AA0 526 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 QSOX2Q6ZRP7 698 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 SYVN1Q86TM6 617 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 CHCHD6Q9BRQ6 235 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 IFT27Q9BW83 186 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 RIOX1Q9H6W3 641 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 DNAJC28Q9NX36 388 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 PLEKHA6Q9Y2H5 1048 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 CLEC3AO75596 197 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ADRB2P07550 413 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ACRP10323 421 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 CDKN1CP49918 316 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 PER3P56645 1201 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 SCGB2B2Q4G0G5 96 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 TMEM220Q6QAJ8 160 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 PLET1Q6UQ28 207 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF227Q86WZ6 799 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ATAD1Q8NBU5 361 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 TSEN2Q8NCE0 465 aaKnown RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 FAM84AQ96KN4 292 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ZSWIM3Q96MP5 696 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 PLOD2O00469 737 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 KDM4BO94953 1096 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 HSD3B1P14060 373 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 S100A2P29034 98 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ITGA7Q13683 1181 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF548Q8NEK5 533 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 DMRTB1Q96MA1 342 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 SLC6A15Q9H2J7 730 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 MRPS5P82675 430 aaKnown RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 GLYATQ6IB77 296 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 CUZD1Q86UP6 607 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 CEP97Q8IW35 865 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 CD99L2Q8TCZ2 262 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 PIWIL1Q96J94 861 aaKnown RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 FBXO5Q9UKT4 447 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 SNX7Q9UNH6 387 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 FADS2P1A8MWK0 482 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 E7ENX8 843 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 RPP14O95059 124 aaKnown RBP11.65□□□□□ -0.55
SHANK2-201ENST00000338508 PRKCGP05129 697 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 PTNP21246 168 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 FLT3LGP49771 235 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 CLEC12AQ5QGZ9 265 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 BICRALQ6AI39 1079 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 OGFOD2Q6N063 350 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 NAPRTQ6XQN6 538 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 C12orf66Q96MD2 445 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 POLR3BQ9NW08 1133 aaPredicted RBP11.65□□□□□ -0.55
SHANK2-201ENST00000338508 KCTD5Q9NXV2 234 aa11.65□□□□□ -0.55
SHANK2-201ENST00000338508 FABP3P05413 133 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 RPIAP49247 311 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 GLUD2P49448 558 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ELF3P78545 371 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ILF3Q12906 894 aaKnown RBP eCLIP11.64□□□□□ -0.555e-8■■■■□ 23.8
SHANK2-201ENST00000338508 GANABQ14697 944 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 PRAMEF17Q5VTA0 474 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 PIGXQ8TBF5 258 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 MFSD3Q96ES6 412 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CIB1Q99828 191 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 WDR77Q9BQA1 342 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CLK4Q9HAZ1 481 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 NME6O75414 186 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 LHCGRP22888 699 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CD47Q08722 323 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 VPS26BQ4G0F5 336 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 SLC25A25Q6KCM7 469 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF350Q9GZX5 532 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 SP140LQ9H930 580 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CLCA3PQ9Y6N3 262 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 PNPLA6Q8IY17 1366 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 E7EQ34 232 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CCNKO75909 580 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CLPXO76031 633 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 VNN2O95498 520 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CBLP22681 906 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CCINQ13939 588 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 LRRC69Q6ZNQ3 347 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CAND1Q86VP6 1230 aaKnown RBP11.64□□□□□ -0.55
SHANK2-201ENST00000338508 TCF12Q99081 682 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 TTYH2Q9BSA4 534 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 TMEM168Q9H0V1 697 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CDH19Q9H159 772 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 VNN3Q9NY84 501 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 SLC30A4O14863 429 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 B3GALT2O43825 422 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CLDN9O95484 217 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 NFATC1O95644 943 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ERBB2P04626 1255 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 CDH12P55289 794 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 KCNJ2P63252 427 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 ECH1Q13011 328 aa11.64□□□□□ -0.55
SHANK2-201ENST00000338508 MAP2K5Q13163 448 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms