RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 CFAP206Q8IYR0 622 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 FAM71DQ8N9W8 422 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 KLHL6Q8WZ60 621 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 MRFAP1L1Q96HT8 127 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 RUFY1Q96T51 708 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 EPB41L1Q9H4G0 881 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 POT1Q9NUX5 634 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 IMP3Q9NV31 184 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 CCDC78A2IDD5 438 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 MGAT4DA6NG13 374 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 C2orf81A6NN90 581 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 SPAG6O75602 509 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 FTCDO95954 541 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 FURINP09958 794 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ANKRD34CP0C6C1 535 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 VCLP18206 1134 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 HALP42357 657 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 VAV2P52735 878 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 DMPKQ09013 629 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ITGA9Q13797 1035 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ZDHHC20Q5W0Z9 365 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ITPRIPL1Q6GPH6 555 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 TMEM135Q86UB9 458 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 TMEM139Q8IV31 216 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 RASGRP3Q8IV61 690 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 CDKL3Q8IVW4 592 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 AVL9Q8NBF6 648 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 SPC24Q8NBT2 197 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 PHC3Q8NDX5 983 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 C12orf66Q96MD2 445 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 SPATA13Q96N96 652 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 TBL1YQ9BQ87 522 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ULBP3Q9BZM4 244 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ZNF768Q9H5H4 540 aaKnown RBP13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 ZNF71Q9NQZ8 489 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 AMFRQ9UKV5 643 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 EFR3BQ9Y2G0 817 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 DNMT3AQ9Y6K1 912 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
NUDCD3-201ENST00000338427 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 ZNF891A8MT65 544 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 BTNL10A8MVZ5 291 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 SUV39H1O43463 412 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 LDB2O43679 373 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 KCNJ13O60928 360 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 KATNA1O75449 491 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 NTRK1P04629 796 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 PTPN7P35236 360 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 DLSTP36957 453 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 CAPZBP47756 277 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 GDF10P55107 478 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 POLE2P56282 527 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 ABHD18Q0P651 414 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 PRPSAP1Q14558 356 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 KCTD19Q17RG1 926 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 SKIDA1Q1XH10 827 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 PRAMEF17Q5VTA0 474 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 FAM199XQ6PEV8 388 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 BORAQ6PGQ7 559 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 C6orf15Q6UXA7 325 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 PRUNE1Q86TP1 453 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 ZDHHC12Q96GR4 267 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 DNAJC1Q96KC8 554 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 ZPBPQ9BS86 351 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 SLC25A18Q9H1K4 315 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 HRASLS2Q9NWW9 162 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 EPHA6Q9UF33 1036 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 CROTQ9UKG9 612 aa13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 AAR2Q9Y312 384 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 HEMK1Q9Y5R4 338 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-201ENST00000338427 OR6C74A6NCV1 312 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 K7EM74 188 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 PPFIA2O75334 1257 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 TJP3O95049 919 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 EBLN1P0CF75 366 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 FGF5P12034 268 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 NELFEP18615 380 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 POLR2CP19387 275 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 PDHA2P29803 388 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 STAT5AP42229 794 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 ZNF140P52738 457 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 ERV3-1Q14264 604 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 GSE1Q14687 1217 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 PLCL1Q15111 1095 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 LONRF2Q1L5Z9 754 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms