RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CYP8B1Q9UNU6 501 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TMEM202A6NGA9 273 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LRRC72A6NJI9 287 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SUPT3HB4E1H0 165 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 KPNA5O15131 536 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 VEGFDO43915 354 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SUPT3HO75486 399 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 IPO13O94829 963 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TPBGLP0DKB5 382 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MTHFD2P13995 350 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PBLDP30039 288 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ARRB2P32121 409 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 IGFALSP35858 605 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TRIM23P36406 574 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PRKAA2P54646 552 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OCRLQ01968 901 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PLEKHS1Q5SXH7 462 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ATG14Q6ZNE5 492 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PIGWQ7Z7B1 504 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TRAPPC5Q8IUR0 188 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 VRK3Q8IV63 474 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CCDC126Q96EE4 140 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TEX101Q9BY14 249 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 WDR26Q9H7D7 661 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CD320Q9NPF0 282 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 THAP1Q9NVV9 213 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NCKIPSDQ9NZQ3 722 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LILRB5O75023 590 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 H2AFYO75367 372 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SEMA4FO95754 770 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TEAD1P28347 426 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 DNAJB13P59910 316 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ABCE1P61221 599 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ASPHQ12797 758 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GBX1Q14549 363 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 BCL7AQ4VC05 210 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TRIM69Q86WT6 500 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GPSM1Q86YR5 675 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SLC22A9Q8IVM8 553 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GJD3Q8N144 294 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CCNYL1Q8N7R7 359 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PJA1Q8NG27 643 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ASZ1Q8WWH4 475 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GRAMD1AQ96CP6 724 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 C7orf26Q96N11 449 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TPSD1Q9BZJ3 242 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ADAMTS6Q9UKP5 1117 aa14.49□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NCF1BA6NI72 391 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SYCE1LA8MT33 242 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NCF1CA8MVU1 366 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SNX3O60493 162 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GPC4O75487 556 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 IGLV3-19P01714 112 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ENO3P13929 434 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GFAPP14136 432 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NCF1P14598 390 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 HK3P52790 923 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PFKFB4Q16877 469 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GKAP1Q5VSY0 366 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CRTC3Q6UUV7 619 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SBSNQ6UWP8 590 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ADAMTSL2Q86TH1 951 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ZNF547Q8IVP9 402 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LILRA3Q8N6C8 439 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PTGR2Q8N8N7 351 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SKA2Q8WVK7 121 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ASB12Q8WXK4 309 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ASB2Q96Q27 587 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TMEM237Q96Q45 408 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FAM126AQ9BYI3 521 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CHRDQ9H2X0 955 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PHPT1Q9NRX4 125 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 UTP6Q9NYH9 597 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CDYLQ9Y232 598 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PCYT1BQ9Y5K3 369 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TMEM114B3SHH9 223 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 EIF3FO00303 357 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NUAK1O60285 661 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CCR10P46092 362 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NFKB2Q00653 900 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TGFBIQ15582 683 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PLA2G4EQ3MJ16 856 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SYTL3Q4VX76 610 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FRA10AC1Q70Z53 315 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SPATA21Q7Z572 469 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CRLF3Q8IUI8 442 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FBXO39Q8N4B4 442 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 RLN3Q8WXF3 142 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FOXJ1Q92949 421 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CLDN23Q96B33 292 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TMEM159Q96B96 161 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TOE1Q96GM8 510 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SEC16BQ96JE7 1060 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ZNF514Q96K75 400 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SORT1Q99523 831 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 C6orf106Q9H6K1 298 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NPHS2Q9NP85 383 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CD274Q9NZQ7 290 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GPR34Q9UPC5 381 aa14.48□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PRKAB1Q9Y478 270 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms