RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NCBP2-AS2Q69YL0 99 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 PIM3Q86V86 326 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 SYT12Q8IV01 421 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TUBA1CQ9BQE3 449 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 OPTCQ9UBM4 332 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 FAM220BPB1ANY3 271 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 B3GAT3O94766 335 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 C4BPBP20851 252 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 ITGA1P56199 1179 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 RPS7P62081 194 aaKnown RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CSNK2BP67870 215 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 GRB7Q14451 532 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CYP20A1Q6UW02 462 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 SPATC1Q76KD6 591 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 TMEM102Q8N9M5 508 aaPredicted RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
COL2A1-201ENST00000337299 MKS1Q9NXB0 559 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 MAT2BQ9NZL9 334 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 ANKMY1Q9P2S6 941 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 ADAM30Q9UKF2 790 aa13.1□□□□□ -0.31
COL2A1-201ENST00000337299 A8MX80 341 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 H3BRB1 525 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 ACOX3O15254 700 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 BMP2P12643 396 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 COX7A2P14406 83 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 SLC10A2Q12908 348 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 LCP2Q13094 533 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 APOFQ13790 326 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 GALNT3Q14435 633 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 RFTN1Q14699 578 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 STYXQ8WUJ0 223 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 BARD1Q99728 777 aaKnown RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 MYOCQ99972 504 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 MED28Q9H204 178 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 MUC13Q9H3R2 512 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 GLOD4Q9HC38 313 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 RNF6Q9Y252 685 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 PRAMEF33A0A0G2JMD5 474 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 H0YJX3 145 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 PDHXO00330 501 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 PRAMEF10O60809 474 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 SERPINF2P08697 491 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 ALDH3B2P48448 385 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 CD47Q08722 323 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 METTL7BQ6UX53 244 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 FGD2Q7Z6J4 655 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 EIF2B4Q9UI10 523 aaKnown RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 RPS6KA6Q9UK32 745 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 AP1G1O43747 822 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 CHRNB1P11230 501 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 RPS3P23396 243 aaKnown RBP eCLIP13.09□□□□□ -0.311e-6■■■■□ 21.3
COL2A1-201ENST00000337299 MAD2L1Q13257 205 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 SLC25A52Q3SY17 297 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 MZB1Q8WU39 189 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 GTPBP3Q969Y2 492 aaKnown RBP13.09□□□□□ -0.31
COL2A1-201ENST00000337299 KCNC2Q96PR1 638 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 MUC3BQ9H195 1237 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 GBA3Q9H227 469 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 CYTH4Q9UIA0 394 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
COL2A1-201ENST00000337299 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.31
COL2A1-201ENST00000337299 PCSK1P29120 753 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 NDUFV1P49821 464 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 SOWAHAQ2M3V2 549 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 NOTUMQ6P988 496 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 GLT6D1Q7Z4J2 308 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 C11orf96Q7Z7L8 435 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 OR13J1Q8NGT2 312 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 LINGO1Q96FE5 620 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 GPR22Q99680 433 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 NTPCRQ9BSD7 190 aaKnown RBP13.08□□□□□ -0.31
COL2A1-201ENST00000337299 TRIT1Q9H3H1 467 aaKnown RBP13.08□□□□□ -0.31
COL2A1-201ENST00000337299 CLCA3PQ9Y6N3 262 aa13.08□□□□□ -0.31
COL2A1-201ENST00000337299 LMO7Q8WWI1 1683 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 SEMA3AQ14563 771 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ACAP2Q15057 778 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 NOL9Q5SY16 702 aaKnown RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 HID1Q8IV36 788 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 LSM14AQ8ND56 463 aaKnown RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 PHF10Q8WUB8 498 aaKnown RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ADGRE3Q9BY15 652 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ITPAQ9BY32 194 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms