RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 APOL5Q9BWW9 433 aa16.32■□□□□ 0.2
CDC42EP4-201ENST00000335793 CCSER2Q9H7U1 834 aa16.32■□□□□ 0.2
CDC42EP4-201ENST00000335793 TLR8Q9NR97 1041 aaKnown RBP16.32■□□□□ 0.2
CDC42EP4-201ENST00000335793 EVLQ9UI08 416 aaPredicted RBP16.32■□□□□ 0.2
CDC42EP4-201ENST00000335793 M0QZQ0 153 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 TAF4O00268 1085 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 CCRL2O00421 344 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 SNAP91O60641 907 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 CAPGP40121 348 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 CHRNB3Q05901 458 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 TNK2Q07912 1038 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 SLC14A2Q15849 920 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 LCN8Q6JVE9 175 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 KLHDC8BQ8IXV7 354 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 ALDH16A1Q8IZ83 802 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 ANKK1Q8NFD2 765 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 OR52B6Q8NGF0 335 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 TMEM125Q96AQ2 219 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 BIRC8Q96P09 236 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 COQ7Q99807 217 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 TRIM54Q9BYV2 358 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 MAGED1Q9Y5V3 778 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 TLR5O60602 858 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 VPS4BO75351 444 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 BMP10O95393 424 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 HOXB8P17481 243 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 MC4RP32245 332 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 NRG1Q02297 640 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 CCDC58Q4VC31 144 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 BEND5Q7L4P6 421 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 GOLM1Q8NBJ4 401 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 BPIFB6Q8NFQ5 453 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 SCHIP1Q9P0W5 487 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 FKBPLQ9UIM3 349 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 SCML2Q9UQR0 700 aa16.31■□□□□ 0.2
CDC42EP4-201ENST00000335793 FFAR3O14843 346 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 GPR42O15529 346 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 GPR39O43194 453 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 IRF1P10914 325 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 SLC2A4P14672 509 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 MAGP20916 626 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 MYF6P23409 242 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 ELK4P28324 431 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 CCT8P50990 548 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 HUNKP57058 714 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 OR4D2P58180 307 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 PARP15Q460N3 678 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 AFMIDQ63HM1 303 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 GPR180Q86V85 440 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZC3H7AQ8IWR0 971 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 PACRGLQ8N7B6 248 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 RHEBL1Q8TAI7 183 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 OSCP1Q8WVF1 389 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 RPF2Q9H7B2 306 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 IKZF3Q9UKT9 509 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 GPR45Q9Y5Y3 372 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 DGKBQ9Y6T7 804 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 PCP4L1A6NKN8 68 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 CAPN1P07384 714 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 UROSP10746 265 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 PKMP14618 531 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 RFC2P35250 354 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 RPS24P62847 133 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 RAB39AQ14964 217 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 IMPG1Q17R60 797 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 MORN1Q5T089 497 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 C16orf59Q7L2K0 433 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 SPATA19Q7Z5L4 167 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 NKAPQ8N5F7 415 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 MYEOVQ96EZ4 313 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 MUS81Q96NY9 551 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 SLC30A3Q99726 388 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 ATP13A1Q9HD20 1204 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 UBA2Q9UBT2 640 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 LIMD1Q9UGP4 676 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 ERVK-11Q9UQG0 969 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 OAS3Q9Y6K5 1087 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 TOR1BO14657 336 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 MLYCDO95822 493 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 CAPNS1P04632 268 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 IST1P53990 364 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 NFKB2Q00653 900 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 BFSP2Q13515 415 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 FUBP1Q96AE4 644 aaKnown RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 SLC39A13Q96H72 371 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZFP14Q9HCL3 533 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 SEPT3Q9UH03 358 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 BRCA2P51587 3418 aa16.3■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PTGES3LE9PB15 166 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 DEAF1O75398 565 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 EIF4EBP2Q13542 120 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms