RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PTRHD1Q6GMV3 140 aaKnown RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 CYP20A1Q6UW02 462 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 DPP10Q8N608 796 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 MAGEE2Q8TD90 523 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 VPS50Q96JG6 964 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 CEP295NLQ96MC4 621 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 TIMMDC1Q9NPL8 285 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 SMPD4Q9NXE4 827 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 MTRRQ9UBK8 725 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 PTBP2Q9UKA9 531 aaKnown RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 PCDHB1Q9Y5F3 818 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 ITGB6P18564 788 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 DLEU7Q6UYE1 221 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 ERI1Q8IV48 349 aaKnown RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 TTC16Q8NEE8 873 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 NUDT8Q8WV74 236 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 MRPL9Q9BYD2 267 aaKnown RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 ACTL8Q9H568 366 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 LIN28AQ9H9Z2 209 aaKnown RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 CD320Q9NPF0 282 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 SMPD3Q9NY59 655 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 POLR3HQ9Y535 204 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 FADS3Q9Y5Q0 445 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 DYTNA2CJ06 578 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 GRXCR2A6NFK2 248 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 FZD6O60353 706 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 TBL1XO60907 577 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 RPS9P46781 194 aaKnown RBP23.04■■□□□ 1.28
NDEL1-201ENST00000334527 FXNQ16595 210 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 TCTN1Q2MV58 587 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 FAM151BQ6UXP7 276 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 OFCC1Q8IZS5 231 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 DHRSXQ8N5I4 330 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 OSCP1Q8WVF1 389 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 RNF145Q96MT1 663 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 CHID1Q9BWS9 393 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 KLF16Q9BXK1 252 aaPredicted RBP23.04■■□□□ 1.28
NDEL1-201ENST00000334527 CIPCQ9C0C6 399 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 ABT1Q9ULW3 272 aaKnown RBP23.04■■□□□ 1.28
NDEL1-201ENST00000334527 TRIM64CA6NLI5 447 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 GOLGA8CPA6NN73 597 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 FFAR2O15552 330 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 HMGCLP35914 325 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 CAPGP40121 348 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 MTPNP58546 118 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 PLD1Q13393 1074 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 ABRAXAS2Q15018 415 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 AAK1Q2M2I8 961 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 AP5B1Q2VPB7 878 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 GLYATQ6IB77 296 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 GPR141Q7Z602 305 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 NSMCE2Q96MF7 247 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 TSEN34Q9BSV6 310 aaKnown RBP23.04■■□□□ 1.28
NDEL1-201ENST00000334527 CLPBQ9H078 707 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 IPPKQ9H8X2 491 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 HSFX1Q9UBD0 423 aa23.04■■□□□ 1.28
NDEL1-201ENST00000334527 RAD51BO15315 384 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 GUCA1CO95843 209 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 OTCP00480 354 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 DGKQP52824 942 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 ESRRGP62508 458 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 SELPLGQ14242 412 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 INO80DQ53TQ3 878 aaPredicted RBP23.03■■□□□ 1.28
NDEL1-201ENST00000334527 CERS6Q6ZMG9 384 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 FAM126BQ8IXS8 530 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 NSUN3Q9H649 340 aaKnown RBP23.03■■□□□ 1.28
NDEL1-201ENST00000334527 MAGEE1Q9HCI5 957 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 MAGEL2Q9UJ55 1249 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 ZMYM5Q9UJ78 669 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 PCDHB3Q9Y5E6 796 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 ARVCFO00192 962 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 CDK4P11802 303 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 HMOX2P30519 316 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 HSPA7P48741 367 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 TAF12Q16514 161 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 RFTN2Q52LD8 501 aaPredicted RBP23.03■■□□□ 1.28
NDEL1-201ENST00000334527 PYCR3Q53H96 274 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 CYBRD1Q53TN4 286 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 SERPINA9Q86WD7 417 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 MYO19Q96H55 970 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 FEM1AQ9BSK4 669 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 BOCQ9BWV1 1114 aa23.03■■□□□ 1.28
NDEL1-201ENST00000334527 HOXA2O43364 376 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 PRAMEF1O95521 474 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 ZNF7P17097 686 aaPredicted RBP23.02■■□□□ 1.28
NDEL1-201ENST00000334527 PLIN5Q00G26 463 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 ARMC12Q5T9G4 340 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 ABRAXAS1Q6UWZ7 409 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 ZNF783Q6ZMS7 281 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 PRR23BQ6ZRT6 265 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 MILR1Q7Z6M3 343 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 CGREF1Q99674 301 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 VPS51Q9UID3 782 aa23.02■■□□□ 1.28
NDEL1-201ENST00000334527 ARNTLO00327 626 aa23.01■■□□□ 1.27
NDEL1-201ENST00000334527 ANKRD28O15084 1053 aa23.01■■□□□ 1.27
NDEL1-201ENST00000334527 RSL1D1O76021 490 aaKnown RBP23.01■■□□□ 1.27
NDEL1-201ENST00000334527 SNAP29O95721 258 aa23.01■■□□□ 1.27
NDEL1-201ENST00000334527 CA5AP35218 305 aa23.01■■□□□ 1.27
NDEL1-201ENST00000334527 SP3Q02447 781 aa23.01■■□□□ 1.27
NDEL1-201ENST00000334527 TRAF3Q13114 568 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms