RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PLD2O14939 933 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 GADD45GO95257 159 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CYP3A5P20815 502 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 FNTBP49356 437 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 S100A10P60903 97 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PRKCDQ05655 676 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SP140Q13342 867 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 IQCCQ4KMZ1 466 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 C9orf64Q5T6V5 341 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 FBXL19Q6PCT2 694 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SMARCD3Q6STE5 483 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 ZPBP2Q6X784 338 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 FOXRED2Q8IWF2 684 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 AP2M1Q96CW1 435 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 KCNC2Q96PR1 638 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TTLL2Q9BWV7 592 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM27Q9HBJ8 222 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 GBA2Q9HCG7 927 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SSU72Q9NP77 194 aaKnown RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CD320Q9NPF0 282 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 RNF19AQ9NV58 838 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 THEGLP0DJG4 465 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SLC7A1P30825 629 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF132P52740 706 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 KLF1Q13351 362 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PON2Q15165 354 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 POM121L1PQ3SYA9 428 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 RAET1GQ6H3X3 334 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 GET4Q7L5D6 327 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-201ENST00000334504 RAB11FIP2Q7L804 512 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SNX20Q7Z614 316 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 NAT16Q8N8M0 369 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 C7orf57Q8NEG2 295 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 SLC38A4Q969I6 547 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM109Q9BVC6 243 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF700Q9H0M5 742 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 MARCH2Q9P0N8 246 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 DNAJB4Q9UDY4 337 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 UBQLN2Q9UHD9 624 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 RIMKLBQ9ULI2 386 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CMAHPQ9Y471 501 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 CASZ1Q86V15 1759 aa9.7□□□□□ -0.86
COL4A6-201ENST00000334504 PER2O15055 1255 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 LINGO3P0C6S8 592 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CDH1P12830 882 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SRCP12931 536 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CYP2C18P33260 490 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MARSP56192 900 aaKnown RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MTPNP58546 118 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TGFB2P61812 414 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 VAMP2P63027 116 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ADAM15Q13444 863 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 DAG1Q14118 895 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FBXO48Q5FWF7 155 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ANKRD46Q86W74 232 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ADAMTS15Q8TE58 950 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 P2RY11Q96G91 374 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FERD3LQ96RJ6 166 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 LGR4Q9BXB1 951 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ZYG11BQ9C0D3 744 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SOHLH2Q9NX45 425 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 INSRRP14616 1297 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CD247P20963 164 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PTX3P26022 381 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ITPKBP27987 946 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 RPL26P61254 145 aaKnown RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 C2orf80Q0P641 193 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MFSD10Q14728 455 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ZMYND11Q15326 602 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 GRIK4Q16099 956 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TSTQ16762 297 aaKnown RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SLC9B1Q4ZJI4 515 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 AADACL4Q5VUY2 407 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FAAH2Q6GMR7 532 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 DENND1CQ8IV53 801 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CXorf40AQ8TE69 158 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 TRAPPC12Q8WVT3 735 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 WACQ9BTA9 647 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 KCNE2Q9Y6J6 123 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CDC42BPBQ9Y5S2 1711 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MAGI3Q5TCQ9 1506 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 RNF225M0QZC1 329 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ACKR2O00590 384 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PIP5K1BO14986 540 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 ALDH2P05091 517 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MYCLP1P12525 358 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CPN2P22792 545 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 HNRNPH3P31942 346 aaKnown RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CSTF2P33240 577 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 SLC26A2P50443 739 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PSMA6P60900 246 aaKnown RBP9.69□□□□□ -0.86
COL4A6-201ENST00000334504 UGT8Q16880 541 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 FAM171A1Q5VUB5 890 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 PDSS2Q86YH6 399 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 MARCH9Q86YJ5 346 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CADM2Q8N3J6 435 aa9.69□□□□□ -0.86
COL4A6-201ENST00000334504 CPT1BQ92523 772 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms