RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 M0R143 59 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 EIF1AYO14602 144 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ENO3P13929 434 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 EIF1AXP47813 144 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 IQCJQ1A5X6 159 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 GJD3Q8N144 294 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ARFGAP1Q8N6T3 406 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 C12orf29Q8N999 325 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SMPDL3BQ92485 455 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ISOC1Q96CN7 298 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC6A16Q9GZN6 736 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HSPBP1Q9NZL4 362 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADAM22Q9P0K1 906 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CKLFQ9UBR5 152 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SEPT9Q9UHD8 586 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF705EA8MWA4 302 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SEC24BO95487 1268 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OXSR1O95747 527 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 POLBP06746 335 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PGCP20142 388 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 FGFR4P22455 802 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ARHGEF7Q14155 803 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PLCXD3Q63HM9 321 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 LRRN1Q6UXK5 716 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 DPY19L3Q6ZPD9 716 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC29A4Q7RTT9 530 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADGRF2Q8IZF7 708 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 DYNC2LI1Q8TCX1 351 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CHTF18Q8WVB6 975 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OTUB2Q96DC9 234 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HSFY1Q96LI6 401 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 LY9Q9HBG7 655 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KCNQ5Q9NR82 932 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CLIC5Q9NZA1 410 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SEC16AO15027 2179 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADH5P11766 374 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB5AP20339 215 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TCTE1Q5JU00 501 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 METTL21CQ5VZV1 264 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMEM126BQ8IUX1 230 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RTKN2Q8IZC4 609 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 LRRC71Q8N4P6 559 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMEM199Q8N511 208 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR4K17Q8NGC6 315 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TFB1MQ8WVM0 346 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CAVIN3Q969G5 261 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SDSLQ96GA7 329 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 VRK1Q99986 396 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 THAP1Q9NVV9 213 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SNTG2Q9NY99 539 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PCDHGC5Q9Y5F6 944 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ROBO2Q9HCK4 1378 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PQ27 194 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PQ64 194 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PQC6 194 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PQD8 194 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TLR5O60602 858 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CDC123O75794 336 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 BPGMP07738 259 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR10J4P0C629 311 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MZF1P28698 734 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CENPCQ03188 943 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TLE2Q04725 743 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF616Q08AN1 781 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 XKR3Q5GH77 459 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 LRRC31Q6UY01 552 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CCDC54Q8NEL0 328 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR56B2PQ8NGI1 322 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR2W6PQ8NHA6 318 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CPA5Q8WXQ8 436 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 BORCS7Q96B45 105 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 GAL3ST4Q96RP7 486 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 C12orf57Q99622 126 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 IFT27Q9BW83 186 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 GPR61Q9BZJ8 451 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 XPNPEP3Q9NQH7 507 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SMCO4Q9NRQ5 59 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC22A11Q9NSA0 550 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 HEATR5BQ9P2D3 2071 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 WASH3PC4AMC7 463 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PHYHO14832 338 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TRAF3IP2O43734 574 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 BBOX1O75936 387 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 NCF1P14598 390 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 IL15P40933 162 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC5A3P53794 718 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 NME3Q13232 169 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 QPCTQ16769 361 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 FFAR4Q5NUL3 377 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SH3RF1Q7Z6J0 888 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 IGFN1Q86VF2 1251 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC22A9Q8IVM8 553 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PCDHAC1Q9H158 963 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 WNT8AQ9H1J5 351 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC2A8Q9NY64 477 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ING1Q9UK53 422 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TET3O43151 1660 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms