RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 VPS4BO75351 444 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 GUCA1CO95843 209 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 ENO2P09104 434 aaPredicted RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 ARSFP54793 590 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 GNA12Q03113 381 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 PRKG2Q13237 762 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 NR6A1Q15406 480 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 FAM171A1Q5VUB5 890 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TRAF7Q6Q0C0 670 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TAS2R42Q7RTR8 314 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 HID1Q8IV36 788 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 MGME1Q9BQP7 344 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TBCDQ9BTW9 1192 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.46
VPS33B-201ENST00000333371 PKD2L2Q9NZM6 624 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 VAPAQ9P0L0 249 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 CORINQ9Y5Q5 1042 aa12.15□□□□□ -0.46
VPS33B-201ENST00000333371 TMEM189-UBE2V1I3L0A0 370 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CBX4O00257 560 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FFAR3O14843 346 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 GPR42O15529 346 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 VPS26AO75436 327 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 EPOP01588 193 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 UGT1A1P22309 533 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 UGT1A4P22310 534 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 HTR1EP28566 365 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CA5AP35218 305 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 UGT1A3P35503 534 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 UGT1A5P35504 534 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 GDF5P43026 501 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 MLLT10P55197 1068 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 PDCD4Q53EL6 469 aaKnown RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 LDLRAP1Q5SW96 308 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 ANKRD26P1Q6NSI1 321 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CYP20A1Q6UW02 462 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FAM43BQ6ZT52 329 aaPredicted RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 GOLM1Q8NBJ4 401 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 ITFG1Q8TB96 612 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 GPR62Q9BZJ7 368 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FARSBQ9NSD9 589 aaKnown RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF639Q9UID6 485 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CDH7Q9ULB5 785 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 E5RI56 91 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 F5H5T6 163 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 STX16O14662 325 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 AXIN1O15169 862 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 INSIG1O15503 277 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 KLK8O60259 260 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 VNN2O95498 520 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 HOXB8P17481 243 aaPredicted RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 PIGAP37287 484 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 MTHFRP42898 656 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 HLCSP50747 726 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CCR3P51677 355 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 YBEYP58557 167 aaPredicted RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 IL2P60568 153 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FAM189BP81408 668 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CCNYL2Q5T2Q4 361 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FAM117BQ6P1L5 589 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 Q6ZNX1 250 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 PDZD8Q8NEN9 1154 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 OR4F6Q8NGB9 312 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 SLC22A17Q8WUG5 538 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 OSCP1Q8WVF1 389 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 SNX19Q92543 992 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 ACDQ96AP0 544 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CSF3RQ99062 836 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 CGREF1Q99674 301 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 DOK1Q99704 481 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 BDH2Q9BUT1 245 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 NUSAP1Q9BXS6 441 aaKnown RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 LHPPQ9H008 270 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 ING2Q9H160 280 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 TLR8Q9NR97 1041 aaKnown RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 TMEM161AQ9NX61 479 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 UBA2Q9UBT2 640 aaPredicted RBP12.14□□□□□ -0.47
VPS33B-201ENST00000333371 PCDHB7Q9Y5E2 793 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 COMMD10Q9Y6G5 202 aa12.14□□□□□ -0.47
VPS33B-201ENST00000333371 NT5C1B-RDH14C9J2C7 533 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 OR7A17O14581 309 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 GJB5O95377 273 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 MLYCDO95822 493 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 ALPLP05186 524 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 SELPP16109 830 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 PRKACGP22612 351 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 GATMP50440 423 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 DUSP4Q13115 394 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 TAF1AQ15573 450 aaPredicted RBP12.13□□□□□ -0.47
VPS33B-201ENST00000333371 AP5B1Q2VPB7 878 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 GTDC1Q4AE62 458 aa12.13□□□□□ -0.47
VPS33B-201ENST00000333371 AASDHQ4L235 1098 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms