RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 RETSATQ6NUM9 610 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 SLC2A7Q6PXP3 512 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 Q6ZNB5 142 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 PTRH1Q86Y79 214 aaKnown RBP20.17■□□□□ 0.82
LINC01006-201ENST00000333319 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
LINC01006-201ENST00000333319 RBFAQ8N0V3 343 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 DDI1Q8WTU0 396 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 TMEM169Q96HH4 297 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 C17orf80Q9BSJ5 609 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 C2orf49Q9BVC5 232 aaPredicted RBP20.17■□□□□ 0.82
LINC01006-201ENST00000333319 CFHR5Q9BXR6 569 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 IPPKQ9H8X2 491 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 IL26Q9NPH9 171 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 GNPTGQ9UJJ9 305 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 CCDC160A6NGH7 325 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 A8MX80 341 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 SLC25A14O95258 325 aaPredicted RBP20.16■□□□□ 0.82
LINC01006-201ENST00000333319 TRBC1P01850 177 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 HSPA7P48741 367 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 NR6A1Q15406 480 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 SNX20Q7Z614 316 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 ZFAND4Q86XD8 727 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 EPHX4Q8IUS5 362 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 MUC13Q9H3R2 512 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 PIF1Q9H611 641 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 ZMYM5Q9UJ78 669 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 PADI4Q9UM07 663 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 USP22Q9UPT9 525 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 INSL5Q9Y5Q6 135 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 GPIP06744 558 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 G6PDP11413 515 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 RPS3P23396 243 aaKnown RBP eCLIP20.16■□□□□ 0.82
LINC01006-201ENST00000333319 RGS4P49798 205 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 RAB33AQ14088 237 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.16■□□□□ 0.82
LINC01006-201ENST00000333319 INTS11Q5TA45 600 aaKnown RBP20.16■□□□□ 0.82
LINC01006-201ENST00000333319 TMCO2Q7Z6W1 182 aaPredicted RBP20.16■□□□□ 0.82
LINC01006-201ENST00000333319 TRPV3Q8NET8 790 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 ZFP28Q8NHY6 868 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 GRIN3AQ8TCU5 1115 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 SH3GL3Q99963 347 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 ANKRD60Q9BZ19 345 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 CAAP1Q9H8G2 361 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 HEBP1Q9NRV9 189 aa20.16■□□□□ 0.82
LINC01006-201ENST00000333319 LSM1O15116 133 aaKnown RBP20.15■□□□□ 0.82
LINC01006-201ENST00000333319 H6PDO95479 791 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 OTCP00480 354 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 ITGALP20701 1170 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 HNF1BP35680 557 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 NR1H2P55055 460 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 EEFSECP57772 596 aaKnown RBP20.15■□□□□ 0.82
LINC01006-201ENST00000333319 EMX2Q04743 252 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 LSAMPQ13449 338 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 ABRAXAS2Q15018 415 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 FAM117BQ6P1L5 589 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 MILR1Q7Z6M3 343 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 REM2Q8IYK8 340 aaPredicted RBP20.15■□□□□ 0.82
LINC01006-201ENST00000333319 PDPRQ8NCN5 879 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 TSPAN14Q8NG11 270 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 NUDT8Q8WV74 236 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 TFAP2CQ92754 450 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 CENPNQ96H22 339 aaPredicted RBP20.15■□□□□ 0.82
LINC01006-201ENST00000333319 APOL5Q9BWW9 433 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 FAM126AQ9BYI3 521 aaPredicted RBP20.15■□□□□ 0.82
LINC01006-201ENST00000333319 TNKS2Q9H2K2 1166 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 OLAHQ9NV23 265 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 ELOVL2Q9NXB9 296 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 PTBP2Q9UKA9 531 aaKnown RBP20.15■□□□□ 0.82
LINC01006-201ENST00000333319 TCRBV5S2A0A599 114 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 TAPBPO15533 448 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 SPATA31D3P0C874 917 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 HMOX2P30519 316 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 TRAF3Q13114 568 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 AP5B1Q2VPB7 878 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 SPATA31D4Q6ZUB0 917 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 PACRGLQ8N7B6 248 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 EGFL8Q99944 293 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 PNPLA3Q9NST1 481 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 CLEC4EQ9ULY5 219 aa20.15■□□□□ 0.82
LINC01006-201ENST00000333319 RNF103-CHMP3A0A140T963 221 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.14■□□□□ 0.81
LINC01006-201ENST00000333319 BPIP17213 487 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 DGKAP23743 735 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 GDF5P43026 501 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 CCT8P50990 548 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 AAK1Q2M2I8 961 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 RFTN2Q52LD8 501 aaPredicted RBP20.14■□□□□ 0.81
LINC01006-201ENST00000333319 CYP20A1Q6UW02 462 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 HID1Q8IV36 788 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 SLC39A11Q8N1S5 342 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 ZNF558Q96NG5 402 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 RBM38Q9H0Z9 239 aaKnown RBP20.14■□□□□ 0.81
LINC01006-201ENST00000333319 ACTL8Q9H568 366 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 IL21Q9HBE4 155 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 TMEM45AQ9NWC5 275 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 CRLS1Q9UJA2 301 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 MYRFQ9Y2G1 1151 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 OARD1Q9Y530 152 aa20.14■□□□□ 0.81
LINC01006-201ENST00000333319 POLR3HQ9Y535 204 aaPredicted RBP20.14■□□□□ 0.81
LINC01006-201ENST00000333319 GLYATL1P3A0A0U1RQE8 302 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms