RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GABARAPL2P60520 117 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 LAIR2Q6ISS4 152 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 ABI1Q8IZP0 508 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 BRSK1Q8TDC3 778 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 CDKN2AIPNLQ96HQ2 116 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 ZNF583Q96ND8 569 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 FEM1AQ9BSK4 669 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 CPA4Q9UI42 421 aa23.31■■□□□ 1.32
TSKU-201ENST00000333090 FAM32AQ9Y421 112 aaKnown RBP23.31■■□□□ 1.32
TSKU-201ENST00000333090 STX16O14662 325 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 HS6ST1O60243 411 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 NDUFS2O75306 463 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 PRKACGP22612 351 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 PSEN2P49810 448 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 PPP2R2BQ00005 443 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 CCL14Q16627 93 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 CADM3Q8N126 398 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 TTC30BQ8N4P2 665 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 TEX26Q8N6G2 289 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 OR2T12Q8NG77 320 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 PCDH12Q9NPG4 1184 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 AKIP1Q9NQ31 210 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 PAK1IP1Q9NWT1 392 aaPredicted RBP23.3■■□□□ 1.32
TSKU-201ENST00000333090 DOCK3Q8IZD9 2030 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 COL4A4P53420 1690 aaPredicted RBP23.3■■□□□ 1.32
TSKU-201ENST00000333090 SLC1A7O00341 560 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 AQP9O43315 295 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 FGF1P05230 155 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 LSM3P62310 102 aaKnown RBP23.3■■□□□ 1.32
TSKU-201ENST00000333090 EPS8Q12929 822 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 TYSND1Q2T9J0 566 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 CIR1Q86X95 450 aaPredicted RBP23.3■■□□□ 1.32
TSKU-201ENST00000333090 ANKRD13BQ86YJ7 626 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 SCN4BQ8IWT1 228 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 C1orf74Q96LT6 269 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 CD274Q9NZQ7 290 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 FNIP2Q9P278 1114 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 ADGRE2Q9UHX3 823 aa23.3■■□□□ 1.32
TSKU-201ENST00000333090 PLXNB2O15031 1838 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 FAM92AA1XBS5 289 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 MUSKO15146 869 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 DFNA5O60443 496 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 HLA-DPA1P20036 260 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 ALDH4A1P30038 563 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 HTR6P50406 440 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 IFITM3Q01628 133 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 NRG1Q02297 640 aaPredicted RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 DNASE1L3Q13609 305 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 CYP20A1Q6UW02 462 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 IL27RAQ6UWB1 636 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 OR7A2PQ8NGA2 310 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 OR10A6Q8NH74 314 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 TADA1Q96BN2 335 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 THUMPD3Q9BV44 507 aaKnown RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 ACTL8Q9H568 366 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 PRDM5Q9NQX1 630 aaPredicted RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 SACM1LQ9NTJ5 587 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 VAPAQ9P0L0 249 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 NDUFS3O75489 264 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 JRKO75564 520 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 UGT2B4P06133 528 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 ITIH1P19827 911 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 MS4A13Q5J8X5 152 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 USP50Q70EL3 339 aaPredicted RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 SLC47A1Q96FL8 570 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 RBM4BQ9BQ04 359 aaKnown RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 RBM4Q9BWF3 364 aaKnown RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 POLR1EQ9GZS1 481 aaKnown RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 TMEM248Q9NWD8 314 aa23.29■■□□□ 1.32
TSKU-201ENST00000333090 GPC6Q9Y625 555 aaPredicted RBP23.29■■□□□ 1.32
TSKU-201ENST00000333090 LOC100130705A0A1B0GUX0 176 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 XPNPEP2O43895 674 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 HK3P52790 923 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 ERVPABLB-1P60509 514 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 ILF2Q12905 390 aaKnown RBP23.28■■□□□ 1.32
TSKU-201ENST00000333090 PWP1Q13610 501 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 NR6A1Q15406 480 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 PTPRNQ16849 979 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 TXNDC11Q6PKC3 985 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 PEX13Q92968 403 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 PKMYT1Q99640 499 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 HERC2P3Q9BVR0 1158 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 C1QTNF3Q9BXJ4 246 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 ACTR8Q9H981 624 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 MAGEE1Q9HCI5 957 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 POLR3HQ9Y535 204 aaPredicted RBP23.28■■□□□ 1.32
TSKU-201ENST00000333090 ZNF99A8MXY4 864 aaPredicted RBP23.28■■□□□ 1.32
TSKU-201ENST00000333090 E2F6O75461 281 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 POMCP01189 267 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 PCMT1P22061 227 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 ISL1P61371 349 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 SDHAF4Q5VUM1 108 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 LETMD1Q6P1Q0 360 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 SPATA2LQ8IUW3 424 aaPredicted RBP23.28■■□□□ 1.32
TSKU-201ENST00000333090 TTC16Q8NEE8 873 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 PJA1Q8NG27 643 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 METTL6Q8TCB7 284 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 FRS2Q8WU20 508 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 HPS1Q92902 700 aa23.28■■□□□ 1.32
TSKU-201ENST00000333090 TBCDQ9BTW9 1192 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms