RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 THOC5Q13769 683 aaKnown RBP16.06■□□□□ 0.16
C11orf88-201ENST00000332814 KRT33BQ14525 404 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 RNF187Q5TA31 235 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-201ENST00000332814 METRNLQ641Q3 311 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 FAM83HQ6ZRV2 1179 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-201ENST00000332814 PDIK1LQ8N165 341 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 ELMO1Q92556 727 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 C12orf66Q96MD2 445 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 DPYSL5Q9BPU6 564 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 NRSN2Q9GZP1 204 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 WWP1Q9H0M0 922 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 EPB41L1Q9H4G0 881 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 COG4Q9H9E3 785 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 AKAP7Q9P0M2 348 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-201ENST00000332814 PCDHB1Q9Y5F3 818 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 SPTBN2O15020 2390 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 IGHV1OR21-1A0A087WYE8 117 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 UBA6A0AVT1 1052 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PRR19A6NJB7 356 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 IFRD1O00458 451 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 B4GAT1O43505 415 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 SGTAO43765 313 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 BRAFP15056 766 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PGAM1P18669 254 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 ITGA8P53708 1063 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 UBE2IP63279 158 aaKnown RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 CALCOCO2Q13137 446 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 BOP1Q14137 746 aaKnown RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 SEMA3AQ14563 771 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 CLCA4Q14CN2 919 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PLCL1Q15111 1095 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 RPE65Q16518 533 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 BBS9Q3SYG4 887 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PHF19Q5T6S3 580 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PTRHD1Q6GMV3 140 aaKnown RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 FOXR1Q6PIV2 292 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 USP53Q70EK8 1073 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 LDB1Q86U70 411 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 GABPB2Q8TAK5 448 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 ATXN7L3BQ96GX2 97 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 CNTNAP3BQ96NU0 1288 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 FOXP3Q9BZS1 431 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 CCDC86Q9H6F5 360 aaKnown RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 RDH14Q9HBH5 336 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 ZNF624Q9P2J8 865 aaPredicted RBP16.05■□□□□ 0.16
C11orf88-201ENST00000332814 GNPTGQ9UJJ9 305 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 CDC23Q9UJX2 597 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 VPS9D1Q9Y2B5 631 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 WDR37Q9Y2I8 494 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 HEBP2Q9Y5Z4 205 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PRSS21Q9Y6M0 314 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 PLXNB3Q9ULL4 1909 aa16.05■□□□□ 0.16
C11orf88-201ENST00000332814 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 CCDC187A0A096LP49 1063 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 LILRA5A6NI73 299 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 GOLGA8KD6RF30 607 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 GOLGA8TH3BQL2 631 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 PRMT5O14744 637 aaPredicted RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 LIN7AO14910 233 aaPredicted RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 CASC3O15234 703 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 OR1I1O60431 355 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 USP1O94782 785 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 MTHFD1P11586 935 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 AMD1P17707 334 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 OGNP20774 298 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 SLC19A1P41440 591 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 MAGEA3P43357 314 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 ARL4CP56559 192 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 GABREP78334 506 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 DHX9Q08211 1270 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 RPA4Q13156 261 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 EIF3IQ13347 325 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 CAMK2BQ13554 666 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 TMED2Q15363 201 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 LONRF1Q17RB8 773 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 WHAMMP3Q1A5X7 153 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 ANKRD20A4Q4UJ75 823 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 C3orf38Q5JPI3 329 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 NKAIN2Q5VXU1 208 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM26Q6ZUK4 368 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 LRRC6Q86X45 466 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 WDR36Q8NI36 951 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 ZCCHC14Q8WYQ9 949 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 NAT9Q9BTE0 207 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 RAB17Q9H0T7 212 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 UCK1Q9HA47 277 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 MARCH4Q9P2E8 410 aaPredicted RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 SNX24Q9Y343 169 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 UTP11Q9Y3A2 253 aaKnown RBP16.04■□□□□ 0.16
C11orf88-201ENST00000332814 ENTPD2Q9Y5L3 495 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 COLEC10Q9Y6Z7 277 aa16.04■□□□□ 0.16
C11orf88-201ENST00000332814 SEC31AO94979 1220 aaKnown RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 TTC4O95801 387 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 ITGB6P18564 788 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 NDUFS1P28331 727 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 CD1CP29017 333 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 CCKBRP32239 447 aa16.03■□□□□ 0.16
C11orf88-201ENST00000332814 EIF3BP55884 814 aaKnown RBP16.03■□□□□ 0.16
C11orf88-201ENST00000332814 PLOD1Q02809 727 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms