RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 DPEP3Q9H4B8 488 aa17.94■□□□□ 0.46
PKP3-201ENST00000331563 TRIM39Q9HCM9 518 aa17.94■□□□□ 0.46
PKP3-201ENST00000331563 EVLQ9UI08 416 aaPredicted RBP17.94■□□□□ 0.46
PKP3-201ENST00000331563 OAS3Q9Y6K5 1087 aaKnown RBP17.94■□□□□ 0.46
PKP3-201ENST00000331563 RRN3P2A6NIE6 340 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PCMT1P22061 227 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 GTF2E2P29084 291 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 TGFBR1P36897 503 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 AFF1P51825 1210 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 DIO3P55073 304 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 OR4D2P58180 307 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 POU4F1Q01851 419 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 FOXM1Q08050 763 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 FCHO2Q0JRZ9 810 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 FSCN1Q16658 493 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 GNASQ5JWF2 1037 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PTRH1Q86Y79 214 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 CHAC2Q8WUX2 184 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 AMBRA1Q9C0C7 1298 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 ABT1Q9ULW3 272 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 PDZK1P1A8MUH7 402 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 M0QYT0 321 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PPP6CO00743 305 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 CRCPO75575 148 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 LBPP18428 481 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 IMPDH1P20839 514 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 RRM2P31350 389 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PAFAH1B3Q15102 231 aaKnown RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 PKDCCQ504Y2 493 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PAGE3Q5JUK9 113 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PCID2Q5JVF3 399 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 ANKRD34AQ69YU3 496 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 SPESP1Q6UW49 350 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PROSER1Q86XN7 944 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 PNPLA1Q8N8W4 532 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 ARRDC4Q8NCT1 418 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 FAM83FQ8NEG4 500 aaPredicted RBP17.93■□□□□ 0.46
PKP3-201ENST00000331563 SPATA22Q8NHS9 363 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 GRPEL2Q8TAA5 225 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 CNIH3Q8TBE1 160 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 C8orf48Q96LL4 319 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 ZFP42Q96MM3 310 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 FBXO5Q9UKT4 447 aa17.93■□□□□ 0.46
PKP3-201ENST00000331563 ERVH48-1M5A8F1 160 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 HRH2P25021 359 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 ST13P50502 369 aaKnown RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 CLCNKBP51801 687 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 SH3BP2P78314 561 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 LAPTM5Q13571 262 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 BLOC1S3Q6QNY0 202 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 PRR23CQ6ZRP0 262 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 ABI1Q8IZP0 508 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 PPHLN1Q8NEY8 458 aaKnown RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 RPL3LQ92901 407 aaKnown RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 KCNA7Q96RP8 456 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 TRMOQ9BU70 441 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 ERVK-18Q9QC07 812 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 NUDT5Q9UKK9 219 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 A0A1W2PP18 115 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 CCDC154A6NI56 674 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 UPK1AO00322 258 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 LMO2P25791 158 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 MATKP42679 507 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 POLD2P49005 469 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 NOTUMQ6P988 496 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 LYPD8Q6UX82 237 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 CCBE1Q6UXH8 406 aaPredicted RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 TTC9Q92623 222 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 WNT8BQ93098 351 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 LGALS12Q96DT0 336 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 GAD1Q99259 594 aa17.92■□□□□ 0.46
PKP3-201ENST00000331563 REXO4Q9GZR2 422 aaKnown RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 INTS7Q9NVH2 962 aaKnown RBP17.92■□□□□ 0.46
PKP3-201ENST00000331563 LOC100130705A0A1B0GUX0 176 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 FAM72CH0Y354 149 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 hCG_2039718K7EN88 272 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 CAPN1P07384 714 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 CLK1P49759 484 aaKnown RBP17.91■□□□□ 0.46
PKP3-201ENST00000331563 FOXA1P55317 472 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 TPI1P60174 286 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 IL1RL1Q01638 556 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 SOX4Q06945 474 aaPredicted RBP17.91■□□□□ 0.46
PKP3-201ENST00000331563 SLC25A52Q3SY17 297 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 FAM72AQ5TYM5 149 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 FAM72DQ6L9T8 149 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 KIAA1841Q6NSI8 718 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 SPATC1Q76KD6 591 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 FAM72BQ86X60 149 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 MICU2Q8IYU8 434 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 DPF3Q92784 378 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 ZFYVE19Q96K21 471 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 MBOAT4Q96T53 435 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 SMOC2Q9H3U7 446 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 TRHDEQ9UKU6 1024 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 BPTFQ12830 3046 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 ZSWIM8A7E2V4 1837 aa17.91■□□□□ 0.46
PKP3-201ENST00000331563 MBLAC1A4D2B0 266 aaPredicted RBP17.91■□□□□ 0.46
PKP3-201ENST00000331563 CST1P01037 141 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms