RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 MAPK10P53779 464 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 DAOAP59103 153 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 LIPEQ05469 1076 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
TRAK1-201ENST00000327628 PDSS1Q5T2R2 415 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 FAM91A1Q658Y4 838 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 ABHD13Q7L211 337 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 SLC35G5Q96KT7 338 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 APOLD1Q96LR9 279 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 HIST1H2AAQ96QV6 131 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 BRINP2Q9C0B6 783 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-201ENST00000327628 AP5Z1O43299 807 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 COQ9O75208 318 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 PTPN5P54829 565 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 CRADDP78560 199 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 SLC9B1Q4ZJI4 515 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 PLCZ1Q86YW0 608 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 KREMEN1Q96MU8 473 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 SERINC1Q9NRX5 453 aa13.17□□□□□ -0.3
TRAK1-201ENST00000327628 PDP1Q9P0J1 537 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-201ENST00000327628 SPIN1Q9Y657 262 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-201ENST00000327628 ABCC6O95255 1503 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 FAM234BA2RU67 622 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 MAGEB17A8MXT2 336 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 TCEA3O75764 348 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SOX30O94993 753 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 RENP00797 406 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 ZNF30P17039 623 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 CDH3P22223 829 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 HSF2Q03933 536 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 UGCGQ16739 394 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SHDQ96IW2 340 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 TUBGCP5Q96RT8 1024 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PTPRHQ9HD43 1115 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 CD320Q9NPF0 282 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PRAMEF12O95522 483 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 TIE1P35590 1138 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 MASP1P48740 699 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 CRISP3P54108 245 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SLC18A1P54219 525 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 EEFSECP57772 596 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 MAXP61244 160 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SP140Q13342 867 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PDCD4Q53EL6 469 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PLET1Q6UQ28 207 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 RBM18Q96H35 190 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 ARHGEF4Q9NR80 690 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 ZNF222Q9UK12 451 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 PPIEQ9UNP9 301 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 HES2Q9Y543 173 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 FADS2O95864 444 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 UGT2B4P06133 528 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SAGP10523 405 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 FGFR3P22607 806 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SCN1BQ07699 218 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SEMA5AQ13591 1074 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 FAM131AQ6UXB0 335 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
TRAK1-201ENST00000327628 GPER1Q99527 375 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 TMEM150CB9EJG8 249 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 LRCH4O75427 683 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 SASH3O75995 380 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■■□ 24.4
TRAK1-201ENST00000327628 NRG3P56975 720 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 REP15Q6BDI9 236 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 HERVK_113Q902F9 699 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 GPR21Q99679 349 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 USP29Q9HBJ7 922 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 ANKHQ9HCJ1 492 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 N6AMT1Q9Y5N5 214 aa13.16□□□□□ -0.3
TRAK1-201ENST00000327628 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
TRAK1-201ENST00000327628 ZNF879B4DU55 563 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 BTN3A3O00478 584 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 KRT36O76013 467 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 MATN4O95460 622 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 EPHX1P07099 455 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 TACSTD2P09758 323 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 ENDOUP21128 410 aaKnown RBP13.15□□□□□ -0.3
TRAK1-201ENST00000327628 CCR10P46092 362 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 RAB30Q15771 203 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
TRAK1-201ENST00000327628 ARSHQ5FYA8 562 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms