RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TMEM198Q66K66 360 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 TMEM139Q8IV31 216 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 OR2L2Q8NH16 312 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 TCF7L1Q9HCS4 588 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 ITM2AO43736 263 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 AKAP8O43823 692 aaKnown RBP16.27■□□□□ 0.2
SMAD3-201ENST00000327367 GADD45GO95257 159 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 ACSL1P33121 698 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 HSPA7P48741 367 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 ZNF81P51508 661 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 SLC51AQ86UW1 340 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 STON2Q8WXE9 905 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 AGAP2Q99490 1192 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 SAMD9LQ8IVG5 1584 aa16.27■□□□□ 0.2
SMAD3-201ENST00000327367 PDPK1O15530 556 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 FGBP02675 491 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 LINGO3P0C6S8 592 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 SRCP12931 536 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 PLEKHG6Q3KR16 790 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 CLEC12AQ5QGZ9 265 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 AADACL4Q5VUY2 407 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 CHERPQ8IWX8 916 aaKnown RBP16.27■□□□□ 0.19
SMAD3-201ENST00000327367 OXR1Q8N573 874 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 TMEM161BQ8NDZ6 487 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 KXD1Q9BQD3 176 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 TRIM2Q9C040 744 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 NECTIN3Q9NQS3 549 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 TMED5Q9Y3A6 229 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.27■□□□□ 0.192e-6■■□□□ 13.3
SMAD3-201ENST00000327367 GRIN2DO15399 1336 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 TULP3O75386 442 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 PRDX6P30041 224 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 CXCR3P49682 368 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 KLHL26Q53HC5 615 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 PHF13Q86YI8 300 aaPredicted RBP16.27■□□□□ 0.19
SMAD3-201ENST00000327367 POGLUT1Q8NBL1 392 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 HERC2P3Q9BVR0 1158 aa16.27■□□□□ 0.19
SMAD3-201ENST00000327367 A0A1W2PPW3 197 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 XKRYO14609 159 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 THOP1P52888 689 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 TARDBPQ13148 414 aaKnown RBP eCLIP16.26■□□□□ 0.194e-8■■■■■ 28.5
SMAD3-201ENST00000327367 TLR1Q15399 786 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 C1orf186Q6ZWK4 172 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 DHRS1Q96LJ7 313 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 MCCC1Q96RQ3 725 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 IL4I1Q96RQ9 567 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 SLC39A1Q9NY26 324 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PTBP2Q9UKA9 531 aaKnown RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 DDTLA6NHG4 134 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 REM1O75628 298 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 OR4F21O95013 312 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PAPSS2O95340 614 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CD48P09326 243 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CLCQ05315 142 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ANKDD1AQ495B1 522 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 MTFR2Q6P444 385 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 TMED4Q7Z7H5 227 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ELOVL4Q9GZR5 314 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PPIBP23284 216 aaKnown RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 GADD45AP24522 165 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PRKCHP24723 683 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 WNT3AP56704 352 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 POLR2LP62875 67 aaKnown RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 NFE2Q16621 373 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 MARCH9Q86YJ5 346 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PEX5LQ8IYB4 626 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ZMIZ2Q8NF64 920 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 OR5B17Q8NGF7 314 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 OR10Q1Q8NGQ4 319 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CXorf40AQ8TE69 158 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 TIGARQ9NQ88 270 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 XRCC1P18887 633 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 LPOP22079 712 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CSTF2P33240 577 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ARL3P36405 182 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 STT3AP46977 705 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CBLBQ13191 982 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CFAP52Q8N1V2 620 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 HDDC3Q8N4P3 179 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ZYG11BQ9C0D3 744 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 IPPKQ9H8X2 491 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 PCDH18Q9HCL0 1135 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 NUDT15Q9NV35 164 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 MARK1Q9P0L2 795 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 INMTO95050 263 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 SLC25A14O95258 325 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 RXRBP28702 533 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 ADAMTS15Q8TE58 950 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 RERGQ96A58 199 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-201ENST00000327367 SENP8Q96LD8 212 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 COPS8Q99627 209 aa16.26■□□□□ 0.19
SMAD3-201ENST00000327367 CDRT1O95170 752 aa16.25■□□□□ 0.19
SMAD3-201ENST00000327367 CLIC3O95833 236 aa16.25■□□□□ 0.19
SMAD3-201ENST00000327367 VEGFAP15692 232 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms