RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 NFKB2Q00653 900 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 CAP1Q01518 475 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 TGFBIQ15582 683 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 MAPRE1Q15691 268 aaKnown RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 TMTC4Q5T4D3 741 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 SPESP1Q6UW49 350 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 DLEU7Q6UYE1 221 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 GABPB2Q8TAK5 448 aaPredicted RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 TBC1D15Q8TC07 691 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 EID2BQ96D98 161 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 TRIM15Q9C019 465 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 TOR3AQ9H497 397 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 CIDEBQ9UHD4 219 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 PCDHGA11Q9Y5H2 935 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 VWA8A3KMH1 1905 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 H0Y626 953 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 UPK1AO00322 258 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 XPNPEP2O43895 674 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 MITFO75030 526 aaPredicted RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 TRIM16O95361 564 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 PKMP14618 531 aaKnown RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 ATP4BP51164 291 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 ZNF140P52738 457 aaPredicted RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 GALNT18Q6P9A2 607 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 FAM151BQ6UXP7 276 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 R3HCC1LQ7Z5L2 792 aaKnown RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 SLC15A4Q8N697 577 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 CD200R1Q8TD46 325 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 SLC22A17Q8WUG5 538 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 SDCCAG3Q96C92 435 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 TSPAN18Q96SJ8 248 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 BARD1Q99728 777 aaKnown RBP12.94□□□□□ -0.34
CLGN-201ENST00000325617 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
CLGN-201ENST00000325617 WASH4PA8MWX3 477 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 H0YJX3 145 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 MATN4O95460 622 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 CCND3P30281 292 aaPredicted RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 BNIP2Q12982 314 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 CYP20A1Q6UW02 462 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 GCNT7Q6ZNI0 430 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 PATL1Q86TB9 770 aaKnown RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 RBM23Q86U06 439 aaKnown RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 TRIB3Q96RU7 358 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 HIPK3Q9H422 1215 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 EPS8L2Q9H6S3 715 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 LEF1Q9UJU2 399 aaPredicted RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 FCF1Q9Y324 198 aaKnown RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 PCDHB5Q9Y5E4 795 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 LCHNA4D1U4 455 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 STX7O15400 261 aaKnown RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 LRATO95237 230 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 MYCP01106 439 aaPredicted RBP12.93□□□□□ -0.34
CLGN-201ENST00000325617 KLKB1P03952 638 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 HLA-DPA1P20036 260 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 GSSP48637 474 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 TUBA4AP68366 448 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 MBTPS1Q14703 1052 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 FAM174BQ3ZCQ3 159 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 ANKRD26P1Q6NSI1 321 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 GLB1LQ6UWU2 654 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 DERL2Q9GZP9 239 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
CLGN-201ENST00000325617 F5H5T6 163 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 GNGT2O14610 69 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 VNN2O95498 520 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 ARSFP54793 590 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 IL2P60568 153 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 ITGADQ13349 1161 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 DSC3Q14574 896 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 TRIP4Q15650 581 aaPredicted RBP12.92□□□□□ -0.34
CLGN-201ENST00000325617 CTU2Q2VPK5 515 aaKnown RBP12.92□□□□□ -0.34
CLGN-201ENST00000325617 LRRC73Q5JTD7 316 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 SPANXN4Q5MJ08 99 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 C16orf87Q6PH81 154 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 FRA10AC1Q70Z53 315 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 RHEBL1Q8TAI7 183 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 NCLNQ969V3 563 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 PLGRKTQ9HBL7 147 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 SYTL2Q9HCH5 934 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 PKD2L2Q9NZM6 624 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 PRSS21Q9Y6M0 314 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 NINQ8N4C6 2090 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 SCN10AQ9Y5Y9 1956 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 GLTPD2A6NH11 291 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 OR7A17O14581 309 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 GSTA4O15217 222 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 ZNF623O75123 536 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 EEDO75530 441 aaKnown RBP12.92□□□□□ -0.34
CLGN-201ENST00000325617 PRKD3O94806 890 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 CHEK2O96017 543 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 UROSP10746 265 aa12.92□□□□□ -0.34
CLGN-201ENST00000325617 MYCLP1P12525 358 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms